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Protein Overview: PDS_ARATH

General Information:
Name(s) found: PDS_ARATH [Swiss-Prot]
Description(s) found:
Found 21 descriptions.
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  • 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 566 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA][TAS]
    chloroplast envelope [IDA]
    Biological Process: carotenoid biosynthetic process [IDA]
    carotene biosynthetic process [IDA]
    Molecular Function: phytoene dehydrogenase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVFGNVSAA NLPYQNGFLE ALSSGGCELM GHSFRVPTSQ ALKTRTRRRS TAGPLQVVCV  60
   61 DIPRPELENT VNFLEAASLS ASFRSAPRPA KPLKVVIAGA GLAGLSTAKY LADAGHKPLL 120
  121 LEARDVLGGK IAAWKDEDGD WYETGLHIFF GAYPNVQNLF GELGINDRLQ WKEHSMIFAM 180
  181 PSKPGEFSRF DFPDVLPAPL NGIWAILRNN EMLTWPEKIK FAIGLLPAMV GGQAYVEAQD 240
  241 GLSVKEWMEK QGVPERVTDE VFIAMSKALN FINPDELSMQ CILIALNRFL QEKHGSKMAF 300
  301 LDGNPPERLC MPVVDHIRSL GGEVQLNSRI KKIELNDDGT VKSFLLTNGS TVEGDAYVFA 360
  361 APVDILKLLL PDPWKEIPYF KKLDKLVGVP VINVHIWFDR KLKNTYDHLL FSRSNLLSVY 420
  421 ADMSLTCKEY YDPNRSMLEL VFAPAEEWIS RTDSDIIDAT MKELEKLFPD EISADQSKAK 480
  481 ILKYHVVKTP RSVYKTIPNC EPCRPLQRSP IEGFYLAGDY TKQKYLASME GAVLSGKFCS 540
  541 QSIVQDYELL AASGPRKLSE ATVSSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] PSI-BLAST 42.0 The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
    2 View Details [88..566] PSI-BLAST 59.221849 The structure basis of specific recognitions for substrates and inhibitors of rat monoamine oxidase A


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle