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Protein Overview: CHSY_ARATH

General Information:
Name(s) found: CHSY_ARATH [Swiss-Prot]
Description(s) found:
Found 50 descriptions.
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  • Chalcone synthase OS=Arabidopsis thaliana GN=CHS PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    plant-type vacuole membrane [IDA]
    endoplasmic reticulum [IDA]
    Biological Process: auxin polar transport [IMP]
    response to gravity [IMP]
    response to oxidative stress [IEP]
    chalcone biosynthetic process [IMP]
    response to wounding [IEP]
    response to jasmonic acid stimulus [IEP]
    regulation of anthocyanin biosynthetic process [IEP]
    flavonoid biosynthetic process [IMP][ISS]
    response to UV-B [IMP]
    Molecular Function: naringenin-chalcone synthase activity [IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMAGASSLD EIRQAQRADG PAGILAIGTA NPENHVLQAE YPDYYFRITN SEHMTDLKEK  60
   61 FKRMCDKSTI RKRHMHLTEE FLKENPHMCA YMAPSLDTRQ DIVVVEVPKL GKEAAVKAIK 120
  121 EWGQPKSKIT HVVFCTTSGV DMPGADYQLT KLLGLRPSVK RLMMYQQGCF AGGTVLRIAK 180
  181 DLAENNRGAR VLVVCSEITA VTFRGPSDTH LDSLVGQALF SDGAAALIVG SDPDTSVGEK 240
  241 PIFEMVSAAQ TILPDSDGAI DGHLREVGLT FHLLKDVPGL ISKNIVKSLD EAFKPLGISD 300
  301 WNSLFWIAHP GGPAILDQVE IKLGLKEEKM RATRHVLSEY GNMSSACVLF ILDEMRRKSA 360
  361 KDGVATTGEG LEWGVLFGFG PGLTVETVVL HSVPL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..395] PSI-BLAST 111.0 Chalcone synthase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.14505178497871 bayes_pls_golite062009
  • transferase activity
    		•  1.45483382098717 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  1.12155569250025 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  1.04684145062403 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.932050235566705 bayes_pls_golite062009
  • naringenin-chalcone synthase activity
    		•  0.385839480590315 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] synthase activity
    		•  0.130687514570417 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle