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Protein Overview: CAP8_ARATH

General Information:
Name(s) found: CAP8_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Putative clathrin assembly protein At2g01600 OS=Arabidopsis thaliana GN=At2g01600 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 571 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    Biological Process: clathrin coat assembly [IEA]
    Molecular Function: clathrin binding [IEA]
    binding [ISS]
    phospholipid binding [IEA]
    phosphatidylinositol binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS  60
   61 VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR EGDPTFREEL LNFSQRGRIL 120
  121 QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT 180
  181 RDLDGEELLE QLPALQQLLY RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII 240
  241 NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL 300
  301 TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG LTTEDTEPSH EEREMLPSDD VVVVSEETEP 360
  361 SPPPPPSANA QNFIDTDDLW GLNTGAPDTS VIEDQNALAL AIVSTDADPP TPHFGQPNNY 420
  421 DPTGWELALV TAPSSDISAS TERKLAGGLD TLTLSSLYDD GAYIASQRPV YGAPAPNPFA 480
  481 SHDPFASSNG TAPPPQQQAV NNPFGAYQQT YQHQPQPTYQ HQSNPPTNNS NPFGDFGEFP 540
  541 VNPVSQQPNT SGYGDFSVNQ HNNPFRSTGL I

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..330] PSI-BLAST 85.69897 Clathrin assembly lymphoid myeloid leukaemia protein, Calm
    2 View Details [331..397] deduced N/A No confident structure predictions are available.
    3 View Details [398..571] PSI-BLAST 6.154902 Sec24

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle