YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CAP17_ARATH

General Information:
Name(s) found: CAP17_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
SHOW ALL
  • Putative clathrin assembly protein At5g10410 OS=Arabidopsis thaliana GN=At5g10410 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 338 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: binding [ISS]
    phospholipid binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGLKTHIIG KFKDKASIGK ARLVHSFGST AVKYIHLALL KSTTRTPNKP PNSDYVSAVI  60
   61 SYSNSRYAPA AFSAALWRLR VTKNAIVATK SLIVIHKLIK SSRDKFEGLG HGRNNLKLNE 120
  121 FSDKSSNLTL ELSQWIRWYG QYLDRLSWVP KVLGSFPNLL VNPKDKVEEK DRVSSYQTGY 180
  181 IIRQTDSLVS FFEHICTRPE IPPMFQNKIV DEIRELVIED YFKIVRLVMV RLQVLFERLI 240
  241 KPGVKPIGDL GLNDFSLLLV RLVECKESLS GLFWRCRRLA DDFWCLVEML KAETEKKNNK 300
  301 QMIELAGLVQ TTVKDDEEMI ELVGSVQPEW VTFDDSDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..338] PSI-BLAST 70.69897 Clathrin assembly lymphoid myeloid leukaemia protein, Calm

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle