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Protein Overview: CAP16_ARATH

General Information:
Name(s) found: CAP16_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Putative clathrin assembly protein At4g40080 OS=Arabidopsis thaliana GN=At4g40080 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 365 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: phospholipid binding [IEA]
    binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRITSFADL IGRIKDKASQ SKAALVSSNT KSKTLSFHLS VLRATTHDPS TPPGNRHLAV  60
   61 ILSAGTGSRA TASSAVESIM ERLHTTGDAC VALKSLIIIH HIVKHGRFIL QDQLSVFPAS 120
  121 GGRNYLKLSA FRDEKSPLMW ELSSWVRWYA LYLEHLLSTS RIMGFFISST SSTIHKEEYE 180
  181 EMVSSLTNSD LLREIDALVG LLEEACKIPD LPFSGGKSLA DKITQLVGED YVSSINELYT 240
  241 RFNEFKERSN TLSFGDTIEL VCALKRLESC KERLSEICHG NWKRGWIDGF WGLVLEVKGI 300
  301 IGNLEDNYGQ IEKSIVGFGK RDKGYESARF TDRLIIGYSN PVRFSSGRFS NVDRFNFPVS 360
  361 GRVLC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..365] PSI-BLAST 69.221849 Clathrin assembly lymphoid myeloid leukaemia protein, Calm

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle