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Protein Overview: CAP13_ARATH

General Information:
Name(s) found: CAP13_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Putative clathrin assembly protein At1g25240 OS=Arabidopsis thaliana GN=At1g25240 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 376 amino acids

    Gene Ontology:
    Cellular Component: clathrin coat [IEA]
    mitochondrion [IEA]
    Biological Process: clathrin coat assembly [IEA]
    Molecular Function: clathrin binding [IEA]
    binding [ISS]
    phospholipid binding [IEA]
    phosphatidylinositol binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLWKRASGA LKDRKTLFTI GFSRKTSFRN PDLDSAIIHA TSHDDSSVDY HNAHRVYKWI  60
   61 RSSPANLKPL VHALSSRVNR TRSWIVALKA LMLVHGVLCC KVTSLQEIRR LPFDLSDFSD 120
  121 GHSRPSKTWG FNAFIRAYFS FLDQYSFFLS DQIRRRHKKP QLDSVNQELE RIEKLQSLLH 180
  181 MLLQIRPMAD NMKKTLILEA MDCVVIEIFD IYGRICSAIA KLLIKIHPAA GKAEAVIALK 240
  241 IVKKATSQGE DLALYFEFCK EFGVSNAHDI PKFVTIPEED IKAIEKVING VEEEEVKKKE 300
  301 DEVEEEKSII LVERPELQTI ITDKWEIFED DFCFTCKDIK ETDQHRKFNM DPSPLPLIVI 360
  361 DEPVYFTHTL PDLITF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 75.39794 Clathrin assembly lymphoid myeloid leukaemia protein, Calm
    2 View Details [288..376] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle