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Protein Overview: CAP12_ARATH

General Information:
Name(s) found: CAP12_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Putative clathrin assembly protein At1g68110 OS=Arabidopsis thaliana GN=At1g68110 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: clathrin coat [IEA]
    Biological Process: clathrin coat assembly [IEA]
    Molecular Function: clathrin binding [IEA]
    phospholipid binding [IEA]
    binding [ISS]
    phosphatidylinositol binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLWKRAAAA IKDRKSLLAV GFSRRNSSYR NADLEAAIIK ATSHDDSSVD YSNAHRVYKW  60
   61 IRSSPLNLKT LVYAISSRVN HTRSWIVALK SLMLLHGVLC CKVPSVVGEF RRLPFDLSDF 120
  121 SDGHSCLSKT WGFNVFVRTY FAFLHHYSSF LSDQIHRLRG NNRRSLEKTS DSVIQELERI 180
  181 QKLQSLLDMI LQIRPVADNM KKTLILEAMD CLVIESINIY GRICGAVMKV LPLAGKSEAA 240
  241 TVLKIVNKTT SQGEDLIVYF EFCKGFGVSN AREIPQFVRI PEEEVEAIEK MIDTVQEKPK 300
  301 LEKDEEKEDE KAMVVLEQPK KLQTIITDKW EIFEDDYRCF DRKDKWEIFE DEYHQNHLPL 360
  361 ITMNQPVYIT YTMPDLITF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..379] PSI-BLAST 73.39794 Clathrin assembly lymphoid myeloid leukaemia protein, Calm

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.47

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle