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Protein Overview: CAP11_ARATH

General Information:
Name(s) found: CAP11_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Putative clathrin assembly protein At1g33340 OS=Arabidopsis thaliana GN=At1g33340 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 374 amino acids

    Gene Ontology:
    Cellular Component: clathrin coat [IEA]
    Biological Process: clathrin coat assembly [IEA]
    Molecular Function: clathrin binding [IEA]
    phospholipid binding [IEA]
    binding [ISS]
    phosphatidylinositol binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLDLSAKFR QVLGLAKDHA SIGRAIVQNY NEKAFFDIEV AVVRATSHDD CPVDDKTMHE  60
   61 ILFLVSNTPG SIPFLAEQIS RRLAKTRDCL VAGKTLLLFH RLLRGSSRSI EQQLHIAHTS 120
  121 GHLQIGCSWF MMSLDSRSFV FLQNYVAYLQ ERVGWIINQA GKLEPVMSGG TKFSRYKEKS 180
  181 MDLVFHILPK CQEFIAQVLK CSPVDAWPID NLVQAATGNI LKESFQVYMT YSDGMTALVS 240
  241 MLFDLSRPAR DLACGMLRKA SQQIQDLRIL YDKCRGFAGM KSLDYPSVQA ISMDHIVALE 300
  301 ECSSYGGKRG FSLSTNLRDA ITCNELKQEQ HSASFSSTSP FSLPVETKIS MVWVVFDNED 360
  361 GEESDKQTEK AYER

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..374] PSI-BLAST 80.0 Clathrin assembly lymphoid myeloid leukaemia protein, Calm

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.229007340928547 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle