YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: AROG_ARATH

General Information:
Name(s) found: AROG_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 507 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA][TAS]
    Biological Process: aromatic amino acid family biosynthetic process [TAS]
    chorismate biosynthetic process [IGI]
    Molecular Function: protein binding [IPI]
    3-deoxy-7-phosphoheptulonate synthase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTLNASSPL TTKSFLPYRH APRRPISFSP VFAVHSTDPK KSTQSASASV KWSLESWKSK  60
   61 KALQLPDYPD QKDVDSVLQT LSSFPPIVFA GEARKLEDKL GQAAMGQAFM LQGGDCAESF 120
  121 KEFNANNIRD TFRVLLQMGV VLMFGGQLPV IKVGRMAGQF AKPRSDPFEE KDGVKLPSYR 180
  181 GDNINGDAFD EKSRIPDPHR MVRAYTQSVA TLNLLRAFAT GGYAAMQRVS QWNLDFTQHS 240
  241 EQGDRYRELA NRVDEALGFM GAAGLTSAHP IMTTTEFWTS HECLLLPYEQ ALTREDSTSG 300
  301 LYYDCSAHML WVGERTRQLD GAHVEFLRGI ANPLGIKVSD KMVPSELVKL IEILNPQNKP 360
  361 GRITVIVRMG AENMRVKLPN LIRAVRGAGQ IVTWVSDPMH GNTIMAPGGL KTRSFDAIRA 420
  421 ELRAFFDVHD QEGSFPGGVH LEMTGQNVTE CVGGSRTITY NDLSSRYHTH CDPRLNASQS 480
  481 LELAFIIAER LRKRRLGSGN LPSSIGV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..507] PSI-BLAST 1000.0 The Structure of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase from Mycobacterium tuberculosis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  3.04075198078553 bayes_pls_golite062009
  • 3-deoxy-7-phosphoheptulonate synthase activity
    		•  2.96394105633886 bayes_pls_golite062009
  • lyase activity
    		•  1.40463692440932 bayes_pls_golite062009
  • dihydrodipicolinate synthase activity
    		•  1.2687335039487 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.550191215286759 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.21317671520101 bayes_pls_golite062009
  • 3-deoxy-8-phosphooctulonate synthase activity
    		•  0.11229304382048 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.0228214205561801 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle