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Protein Overview: AROF_ARATH

General Information:
Name(s) found: AROF_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 525 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [TAS]
    Biological Process: aromatic amino acid family biosynthetic process [TAS]
    response to bacterium [IEP]
    response to wounding [IEP]
    chorismate biosynthetic process [IDA][IGI]
    Molecular Function: protein binding [IPI]
    3-deoxy-7-phosphoheptulonate synthase activity [IDA][IGI][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSNASSLS TRSIYGGDLS HRPSNRQSSF TFHPAVNTKP KSVNLVTAVH AAEPARNAVS  60
   61 VKESVASSSS GALKWTPESW KLKKALQLPD YPNANELESV LKTIEAFPPI VFAGEARNLE 120
  121 ERLADAAVGK AFLLQGGDCA ESFKEFNATN IRDTFRVLLQ MSIVLTFGGQ VPVIKVGRMA 180
  181 GQFAKPRSDA FEEKDGVKLP SYKGDNINGD TFDEKSRIPD PNRMIRAYTQ SAATLNLLRA 240
  241 FATGGYAAIQ RVTQWNLDFV EQSEQADRYQ ELANRVDEAL GFMSACGLGT DHPLMTTTDF 300
  301 YTSHECLLLP YEQSLTRLDS TSGLYYDCSA HMVWCGERTR QLDGAHVEFL RGIANPLGIK 360
  361 VSNKMDPFEL VKLVEILNPN NKPGRITVIV RMGAENMRVK LPHLIRAVRR SGQIVTWVCD 420
  421 PMHGNTIKAP CGLKTRAFDS ILAEVRAFLD VHEQEGSHAG GIHLEMTGQN VTECIGGSRT 480
  481 VTYDDLSSRY HTHCDPRLNA SQSLELAFIV AERLRKRRTG SQRVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] MSA 1.049994 View MSA. No confident structure predictions are available.
    2 View Details [74..525] PSI-BLAST 1000.0 The Structure of 3-Deoxy-D-Arabino-Heptulosonate 7-Phosphate Synthase from Mycobacterium tuberculosis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  3.04075198078553 bayes_pls_golite062009
  • 3-deoxy-7-phosphoheptulonate synthase activity
    		•  2.96394105633886 bayes_pls_golite062009
  • lyase activity
    		•  1.40463692440932 bayes_pls_golite062009
  • dihydrodipicolinate synthase activity
    		•  1.2687335039487 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.550191215286759 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.21317671520101 bayes_pls_golite062009
  • 3-deoxy-8-phosphooctulonate synthase activity
    		•  0.11229304382048 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.0228214205561801 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle