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Protein Overview: AGL19_ARATH

General Information:
Name(s) found: AGL19_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
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  • Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 219 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: regulation of timing of transition from vegetative to reproductive phase [IMP]
    regulation of transcription, DNA-dependent [ISS]
    vernalization response [IMP]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRGKTEMKR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALVIFSP RSKLYEFSSS  60
   61 SIAATIERYQ RRIKEIGNNH KRNDNSQQAR DETSGLTKKI EQLEISKRKL LGEGIDACSI 120
  121 EELQQLENQL DRSLSRIRAK KYQLLREEIE KLKAEERNLV KENKDLKEKW LGMGTATIAS 180
  181 SQSTLSSSEV NIDDNMEVET GLFIGPPETR QSKKFPPQN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] PSI-BLAST 21.09691 Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
    2 View Details [82..219] Pfam 19.552842 No description for PF01486.8 was found. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.0368771990474 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle