Protein Overview: AGL17_ARATH

General Information:
Name(s) found:	AGL17_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|4314360\|gb\|AAD15571.1\| putative MADS-box protein AGL17 [Arabidopsis thaliana] [NCBI NR] gi\|25307913\|pir\|\|H84614 probable MADS-box protein AGL17 [imported] - Arabidopsis thaliana [NCBI NR] gi\|225898128\|dbj\|BAH30396.1\| hypothetical protein [Arabidopsis thaliana] [NCBI NR] gi\|15227254\|ref\|NP_179848.1\| AGL17 (agamous-like 17); transcription factor [Arabidopsis thaliana] [NCBI NR] gi\|12643745\|sp\|Q38840.2\|AGL17_ARATH RecName: Full=Agamous-like MADS-box protein AGL17 [NCBI NR] Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2 [Swiss-Prot] (Q38840) Agamous-like MADS box protein AGL17 [Swiss-Prot] putative MADS-box protein AGL17 [Arabidopsis thaliana]gi\|12643745\|sp\|Q38840\|AG17_ARATH Agamous-like MADS box protein AGL17gi\|25307913\|pir\|\|H84614 probable MADS-box protein AGL17 [imported] - Arabidopsis thalianagi\|15227254\|ref\|NP_179848.1\| MADS-box pro [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Agamous-like MADS box protein AGL17 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| AGL17 (AGAMOUS-LIKE 17); transcription factor \| chr2:9625452-9628721 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] Agamous-like MADS-box protein AGL17 [nr-271106-contam.fasta] putative MADS-box protein AGL17 [Arabidopsis thaliana] [nr-271106-contam.fasta] AGL17 (AGAMOUS-LIKE 17); transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: AGL17 \| AGAMOUS-like 17 \| chr2:9618372-9621641 FORWARD LENGTH=227 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	227 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA]
Biological Process:	positive regulation of long-day photoperiodism, flowering [IMP]
Molecular Function:	transcription factor activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRGKIVIQK IDDSTSRQVT FSKRRKGLIK KAKELAILCD AEVCLIIFSN TDKLYDFASS  60
   61 SVKSTIERFN TAKMEEQELM NPASEVKFWQ REAETLRQEL HSLQENYRQL TGVELNGLSV 120
  121 KELQNIESQL EMSLRGIRMK REQILTNEIK ELTRKRNLVH HENLELSRKV QRIHQENVEL 180
  181 YKKAYGTSNT NGLGHHELVD AVYESHAQVR LQLSQPEQSH YKTSSNS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..77]	PSI-BLAST	20.69897	Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2
2	View Details	[78..227]	Pfam	14.853872	No description for PF01486.8 was found. No confident structure predictions are available.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: AGL17_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: