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Protein Overview: YKQC_BACSU, RNJ1...

General Information:
Name(s) found: YKQC_BACSU [Swiss-Prot]
RNJ1_BACSU [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • UPF0036 protein ykqC - Bacillus subtilis [Swiss-Prot]
  • Ribonuclease J 1 OS=Bacillus subtilis GN=rnjA PE=1 SV=1 [Swiss-Prot]
    • Organism: Bacillus subtilis
    Length: 555 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFVKNDQTA VFALGGLGEI GKNTYAVQFQ DEIVLIDAGI KFPEDELLGI DYVIPDYTYL  60
   61 VKNEDKIKGL FITHGHEDHI GGIPYLLRQV NIPVYGGKLA IGLLRNKLEE HGLLRQTKLN 120
  121 IIGEDDIVKF RKTAVSFFRT THSIPDSYGI VVKTPPGNIV HTGDFKFDFT PVGEPANLTK 180
  181 MAEIGKEGVL CLLSDSTNSE NPEFTMSERR VGESIHDIFR KVDGRIIFAT FASNIHRLQQ 240
  241 VIEAAVQNGR KVAVFGRSME SAIEIGQTLG YINCPKNTFI EHNEINRMPA NKVTILCTGS 300
  301 QGEPMAALSR IANGTHRQIS INPGDTVVFS SSPIPGNTIS VSRTINQLYR AGAEVIHGPL 360
  361 NDIHTSGHGG QEEQKLMLRL IKPKFFMPIH GEYRMQKMHV KLATDCGIPE ENCFIMDNGE 420
  421 VLALKGDEAS VAGKIPSGSV YIDGSGIGDI GNIVLRDRRI LSEEGLVIVV VSIDMDDFKI 480
  481 SAGPDLISRG FVYMRESGDL INDAQELISN HLQKVMERKT TQWSEIKNEI TDTLAPFLYE 540
  541 KTKRRPMILP IIMEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..427] PSI-BLAST 58.0 No description for 2i7tA was found.
    2 View Details [428..555] MSA 3.131989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle