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Protein Overview: hhf2, hhf3, hhf1

General Information:
Name(s) found: hhf2 / SPBC8D2.03c [Sanger Pombe]
hhf3 / SPBC1105.12 [Sanger Pombe]
hhf1 / SPAC1834.03c [Sanger Pombe]
Description(s) found:
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  • pir||HSZP4 histone H4 [similarity] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|7019763|emb|CAB75771.1| histone H4 h4.1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|5531474|emb|CAB50975.1| histone H4 h4.3 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|4969|emb|CAA28850.1| Histone H4.1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|4967|emb|CAA28855.1| unnamed protein product [Schizosaccharomyces pombe] [NCBI NR]
  • gi|4964|emb|CAA28853.1| unnamed protein product [Schizosaccharomyces pombe] [NCBI NR]
  • gi|2950490|emb|CAA17818.1| histone H4 h4.2 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|2257549|dbj|BAA21442.1| histone H4 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|224836|prf||1202262E histone H4.1 [NCBI NR]
  • gi|19115594|ref|NP_594682.1| histone H4 h4.1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113260|ref|NP_596468.1| histone H4 h4.3 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112358|ref|NP_595566.1| histone H4 h4.2 [Schizosaccharomyces pombe] [NCBI NR]
  • ref|NP_595558.1| histone H4 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|122103|sp|P09322.2|H4_SCHPO RecName: Full=Histone H4 [NCBI NR]
  • histone H4 h4.2 [Sanger Pombe]
  • histone H4 h4.3 [Sanger Pombe]
  • histone H4 h4.1 [Sanger Pombe]
  • Histone H4 OS=Schizosaccharomyces pombe GN=hhf1 PE=1 SV=2 [Swiss-Prot]
  • HISTONE H4: P09322; [pompepVF.fasta]
  • |h4.1|hhf1|histone h4 [pompepnew.fasta]
  • |h4.3|hhf3|histone h4 [pompepnew.fasta]
  • |hhf1|h4.1|histone H4|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • |h4.3|hhf3|histone H4|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • |hhf2|ams3, h4.2|histone H4|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • histone H4; histone fold; similar to S. pombe hhf1 and hhf3; similar to S. cerevisiae YBR009C and YNL030W [Schizosaccharomyces pombe]gi|19113260|ref|NP_596468.1| histone h4 [Schizosaccharomyces pombe]gi|19112358|ref|NP_595566.1| histone h4 [Schizosaccha [nrdb_11152004_Chlamydomonas]
  • |hhf2|ams3, h4.2|histone H4 h4.2|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • |hhf1|h4.1|histone H4 h4.1|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • |hhf3|h4.3|histone H4 h4.3|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC8D2.03c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Histone H4.1 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • unnamed protein product [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • histone H4 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • SPAC1834.03c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Histone H4 [nr-271106-contam.fasta]
  • histone H4.1 [nr-271106-contam.fasta]
  • hypothetical protein SPAC1834.03c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC1105.12 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC1105.12 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • histone H4 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Histone H4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=hhf1 PE=1 SV=2 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 103 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear nucleosome [NASLink to PubMed article]
    Biological Process: chromatin assembly or disassembly [NASLink to PubMed article]
    nucleosome assembly [NASLink to PubMed article]
    Molecular Function: DNA binding [NASLink to PubMed article]
    protein binding [IGILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRGKGGKG LGKGGAKRHR KILRDNIQGI TKPAIRRLAR RGGVKRISAL VYEETRAVLK  60
   61 LFLENVIRDA VTYTEHAKRK TVTSLDVVYS LKRQGRTIYG FGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 34.0 Histone H4


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle