YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: rnh-1.1

General Information:
Name(s) found: rnh-1.1 / CE36069 [WormBase]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • WBGene00022888 locus:rnh-1.1 status:Partially_confirmed UniProt:Q09633 protein_id:CCD65937.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 507 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ribonuclease H activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRWFRNFGA LFKKPRGAGL MKNEQTHNLQ RVVQNDITCP EEQRSTGGKG GGGGSHGGHG  60
   61 GSHGGSHGGH GSHGGSYGGH SGHGRSFSTS SGSSGYRGLS SGSTNTSYSK STPRTNSGYS 120
  121 TGKTTKTASS SRNYSNTSST RSTTKPSKSS YSKRSTKSTK SLNYSSSSLG SKSIEKSRRS 180
  181 SRKSGSRQDS VASRRQLRSV SSKPQKKYVA TDMPSTVSTG RSRGRSVYRR NNVNADVSQR 240
  241 QSRSMSVSRG RSRNRSQNRE RSPSIEKSTR SQHVSRKDAF NSHDVLSPTN RSGSVHRSHS 300
  301 AHHERTFEER HKTPNGVWNE MFPKGTLVMY TDGSYLKRPP TSGIGIFVGP GHELNRSQRI 360
  361 RGPIQDNNYA EFIAVRTALQ NALKNENYRD QKVVIRTDCL NVIEALQGTR PTAFVDVKSQ 420
  421 VEFLSKQFPK GVHFQHVYAH AGDPGNEMAD LFAGQASSKS QNSFGGGQRT RSASTARGRS 480
  481 RERNRLRSKS NDPSFIRSRS HSIHSRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] deduced N/A No confident structure predictions are available.
    2 View Details [113..207] MSA 2.100996 View MSA. No confident structure predictions are available.
    3 View Details [208..322] deduced N/A No confident structure predictions are available.
    4 View Details [323..507] PSI-BLAST 40.045757 STRUCTURAL STUDY OF MUTANTS OF ESCHERICHIA COLI RIBONUCLEASE HI WITH ENHANCED THERMOSTABILITY

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle