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Protein Overview: sdf-9

General Information:
Name(s) found: sdf-9 / CE35663 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00004748 locus:sdf-9 status:Confirmed UniProt:G5EGB0 protein_id:CAA19518.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDALink to PubMed article]
    Biological Process: dauer larval development [IGILink to PubMed article][IMPLink to PubMed article]
    protein amino acid dephosphorylation [IEALink to PubMed article]
    Molecular Function: protein tyrosine phosphatase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKYSIRSNI VHKLDDNQPL LSERVTARLE AVNRNRVVKI VPQHRYNVRL TPSMLNRDGY  60
   61 INASLMEFSD VGQKYILTGI PSEDKVFAFW QMVLEQRSPT IIQFADNVEE KLEHYDKYFP 120
  121 DKGDVWSYGH LQVERKSYAI HQGNFHTRNF ILRKGNETHR VLHFTVFGWT ETTTPIMQDF 180
  181 LALRKVMKDT GALNMINPAS ALFRSTMRRY IHTPPSFAPI IQSARGSSRA GAFVVIDLLI 240
  241 RMIDGKKTNL YSVEDLIVKC KHMRIHCVPV ALHHSFIYEA VLDYLLRRNP RFQDFKEPLI 300
  301 AYSESCFVKW SSMDKEIEKF INTKTWFLNE SSRNKFLRSV MPPVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..345] PSI-BLAST 92.09691 Crystal structure of the phosphatase domains of human PTP SIGMA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle