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Protein Overview: CE35436

General Information:
Name(s) found: CE35436 [WormBase]
Description(s) found:
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  • WBGene00008123 locus:ent-6 status:Confirmed UniProt:Q9U3L8 protein_id:CAB62793.2 [WormBase]
  • gi|71984819|ref|NP_001023069.1| hypothetical protein C47A4.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|34555896|emb|CAB62793.2| C. elegans protein C47A4.2b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep111.fasta]
  • Hypothetical protein C47A4.2b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE35436 WBGene00008123 status:Partially_confirmed TR:Q9U3L8 protein_id:CAB62793.2 [wormpep150.fasta]
  • 35436 WBGene00008123 status:Partially_confirmed TR:Q9U3L8 protein_id:CAB62793.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Partially_confirmed TN:CAB62793 protein_id:CAB62793.2 [wormpep115.fasta.reversed]
  • CE35436 WBGene00008123 status:Partially_confirmed UniProt:Q9U3L8_CAEEL protein_id:CAB62793.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE35436 WBGene00008123 status:Partially_confirmed UniProt:Q9U3L8_CAEEL protein_id:CAB62793.2| [wormORF-contam.fasta]
  • C47A4.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE35436 WBGene00008123 status:Confirmed UniProt:Q9U3L8 protein_id:CAB62793.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE35436 WBGene00008123 locus:ent-6 status:Confirmed UniProt:Q9U3L8 protein_id:CAB62793.2 [wormbase_c_elegans_ws234_and_mcherry_10-06-2012_reversed.fasta]
  • CE35436 WBGene00008123 locus:ent-4 status:Confirmed UniProt:Q9U3L8 protein_id:CAB62793.2 [wormpep246-ecoli-contam.fasta]
  • Equilibrative Nucleoside Transporter OS=Caenorhabditis elegans GN=ent-4 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 451 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: transport [IEALink to PubMed article]
    Molecular Function: nucleoside transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVIRDYESIS PVDPPPLYTQ DQNTEDLASI VDGADSSDEH NELIPEDKGR IVFWIILLNG  60
   61 IGVLLPWNMF ITIAPQYYVD YWFTVNGTAT HYADSFQSAM GVVAQVPNLI VAIINVLNLI 120
  121 RGPLLYRVLA PLAFNSLLIV IILALVIFQQ PSDQARNWFY IVSLIIVMAM NASNGLYQNS 180
  181 FFGMAADFPA KYSNAVVIGT NICGTFTSVL AIVATLAFST QAETVALIYF GISLLILFVC 240
  241 LVSWWFCKKM DFYKYYVSKG NRLRAAQEQS SFDYRPYLET IKYCWLQCIC VFLVYFVSLS 300
  301 VFPTVLAGFQ PGYTVFPNDV YAGIAVFLNF NFFAAVGNVA ATFVTFPGPR LLIVPCVIRL 360
  361 LFIPFFMFSN YLPHSRTMGV LFTNEWIFFF GNTLLAFTSG YFSSLGMMYT PRVCPPEYSK 420
  421 LAGQVSALSL VLGITAGVSF TYAITAMVNN F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..451] PSI-BLAST 13.522879 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • binding
    		•  0.818732184064642 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle