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Protein Overview: tmd-2

General Information:
Name(s) found: tmd-2 / CE35225 [WormBase]
Description(s) found:
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  • WBGene00006582 locus:tmd-2 status:Confirmed UniProt:H2KYK4 protein_id:CCD63653.1 [WormBase]
  • gi|71983341|ref|NP_505151.2| TropoMoDulin family member (tmd-2) [Caenorhabditis elegans] [NCBI NR]
  • gi|33620920|gb|AAQ23120.1| Tropomodulin protein 2, isoform a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep111.fasta]
  • Tropomodulin protein 2, isoform a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE35225 WBGene00006582 locus:tmd-2 status:Confirmed TR:Q17823 protein_id:AAQ23120.1 [wormpep150.fasta]
  • 35225 WBGene00006582 locus:tmd-2 status:Confirmed TR:Q17823 protein_id:AAQ23120.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:tmd-2 status:Confirmed TR:Q17823 protein_id:AAQ23120.1 [wormpep115.fasta.reversed]
  • CE35225 WBGene00006582 locus:tmd-2 status:Confirmed UniProt:Q17823_CAEEL protein_id:AAQ23120.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE35225 WBGene00006582 locus:tmd-2 status:Confirmed UniProt:Q17823_CAEEL protein_id:AAQ23120.1| [wormORF-contam.fasta]
  • TropoMoDulin family member (tmd-2) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE35225 WBGene00006582 locus:tmd-2 status:Confirmed UniProt:Q17823 protein_id:AAQ23120.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE35225 WBGene00006582 locus:tmd-2 status:Confirmed UniProt:H2KYK4 protein_id:CCD63653.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of Q8I7M7, TropoMoDulin OS=Caenorhabditis elegans GN=tmd-2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: tropomyosin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEELQQLRT NASSDLMTDE DFIATIESMG VEAQEREIND LLKAMHENRI VSWDEAERIL  60
   61 METDQTPIKC SLPEQTRPTE PENEVDVDQC IKKLLDNDPS LKEINLNNMK RTPVPAIKRL 120
  121 LEALAYNEHC ERISLANMGL YDHDINVLVT VIEMNQAIKK VNLETNYLSG DFFSKLFKAA 180
  181 LVNESVEEIK AVNQGVSFST QSEKEIIDAI VKNHGLTKIS INFRLPEGRH KVENATLRNG 240
  241 ELKRVKRREA AQKARLEAEE LAKNPVPKLA PEPKKEPEPK KMAPKFGEEK QAPMPVYKLN 300
  301 RTLSRDVQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..308] PSI-BLAST 23.0 Tropomodulin C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle