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Protein Overview: glb-21

General Information:
Name(s) found: glb-21 / CE34964 [WormBase]
Description(s) found:
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  • WBGene00011296 locus:glb-21 status:Partially_confirmed UniProt:Q7YWV3 protein_id:CAE17922.1 [WormBase]
  • gi|71992651|ref|NP_001023339.1| GLoBin family member (glb-21) [Caenorhabditis elegans] [NCBI NR]
  • gi|33300310|emb|CAE17922.1| Hypothetical protein R102.9 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep111.fasta]
  • Hypothetical protein R102.9 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE34964 WBGene00011296 status:Predicted TR:Q7YWV3 protein_id:CAE17922.1 [wormpep150.fasta]
  • 34964 WBGene00011296 status:Predicted TR:Q7YWV3 protein_id:CAE17922.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Predicted TR:Q7YWV3 protein_id:CAE17922.1 [wormpep115.fasta.reversed]
  • CE34964 WBGene00011296 locus:glb-21 status:Predicted UniProt:Q7YWV3_CAEEL protein_id:CAE17922.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE34964 WBGene00011296 locus:glb-21 status:Predicted UniProt:Q7YWV3_CAEEL protein_id:CAE17922.1| [wormORF-contam.fasta]
  • R102.9 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE34964 WBGene00011296 locus:glb-21 status:Predicted UniProt:Q7YWV3 protein_id:CAE17922.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE34964 WBGene00011296 locus:glb-21 status:Partially_confirmed UniProt:Q7YWV3 protein_id:CAE17922.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • GLoBin related OS=Caenorhabditis elegans GN=glb-21 PE=3 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxygen transport [IEALink to PubMed article]
    Molecular Function: oxygen binding [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    heme binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNCFGRNS ERSMYELTTD EMQAVRDAWK RAKEREIGKH ILRALIERKP QFKDYFGIHV  60
   61 DEKNHDVYSC REFQLQAHRI QNFLDTAVSS LGFCPIGNIH QMAYRIGQIH FYRGVNFGAD 120
  121 NWLTFKKVTV EIVTKDCGNS ESSSMDLKSV PSLFPSSSST VIIIGWEKFM SSVIREMKKG 180
  181 FLDEARRNCH DEETKF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] PSI-BLAST 39.522879 Hemoglobin, beta-chain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle