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Protein Overview: CE34135

General Information:
Name(s) found: CE34135 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00013545 status:Partially_confirmed UniProt:Q9XW73 protein_id:CAA22097.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 715 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNFGGPGGP MYGGAGGGGG GPPRGPPQQP PQPQGGGVAV PFPIPQGITQ AHYHQYKQEL  60
   61 TNFQQNRLAL LNQALNRGQL THEQFQQEVH NVNERIRGAM TQYAAQCSQR AAAAQQQQQQ 120
  121 QNQAAGQMPP PQMAPVMMSA AEKKKQMEMQ KHQRMAQQQQ MQQQQGGMSF PPGSTLQQQQ 180
  181 QQMRMQFQRQ QQQQQQQLQQ NPQNQGYGRM GGGPQYPGMQ QQQQLTHQNP GMQQQQMQQP 240
  241 QMQQTPQSHG PIPVSNPSSA QQMQYYQQQQ QQQLQLQQNQ QMQMQQQQMQ QHQQQHPGMG 300
  301 GPEMGGHMHA QQGAPGSQAA PVQQQQQIQQ QAPPQAPAEK TEDMKYKELL KEMKLQYLEA 360
  361 LQGMQRRQAQ QKGLVQMVNI LEGDRIVSYD HLLSLKTPLH RLMTRDCPTF PLMEEIRKVV 420
  421 FKKKEDREKA MLMSFVGEKD NLSAQVESAD KRLSEQSKDD DPMGVKPWRS VKHLTIRVPD 480
  481 FVRNLTGNED RKAFLKRPRA VSAEEDEAVV GAKKVKEEEQ DDTSSQASED EDISLIQSEF 540
  541 VIKTVFDSRK PWIVPPKARE ELSNISHWNV DEHCLPSCSA TPFIIVCIKS PSLLVNPLRI 600
  601 SLPRTYPIDP ATVQFDRTFP QDSEHGPVLQ KLFEKNLGAK TTVRTMTDFV EAYCSACEEY 660
  661 QIFMPKYNNE SSPEQSSQPG SAHSSQQQKT PEMAYHSRLP AAVSNPIIAQ KGIVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..343] PSI-BLAST 15.522879 Heavy meromyosin subfragment
    2 View Details [344..549] PSI-BLAST 6.69897 Tropomyosin
    3 View Details [550..715] FFAS03 1.02 Toxoplasma gondii ubiquitin conjugating enzyme TgTwinScan_2721- E2 domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.313907187568717 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle