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Protein Overview: CE33893

General Information:
Name(s) found: CE33893 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00013289 locus:tag-273 LIM domain containing proteins status:Partially_confirmed TR:Q86CZ7 protein_id:CAD89758.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTAGGGGVH DELAQLKSLR EKKGDFESSC KEVDNVEKKT QIEKDLLAAG KVKANAEKFI  60
   61 SGAALENSDD ESESADRDPN IIRGSKKAEK VELNFENVGD IKNKWKEGNV ETAEAKEAAE 120
  121 RKELEALKGG VSVKDRFKER GDNDEQVVER SWNKDELSTS AAAEARKSFM AGSAYDAANP 180
  181 VEKTVKDLDD LKFGQLKGFK DKFEKGEEGV EVQKTQVDLG EGVQLGNIKA TFEKGNAVDE 240
  241 SEMTAEERAE LKKREIEAEF QRYKLARKSA KAQEEVVGEE EANKGYNPLD VEVKMAGKAR 300
  301 EKFRQIDASG ASPVLPQQSK KSTEPSKWDK KDDKPVAEVI NRRNTDEQEP EEEEDDAFDV 360
  361 KNLMNKFKNI GDSGNQKTQN TEHRAELEAL KCAAKDFKAK FENAGEADAD AAVVEAKRQQ 420
  421 MEEEFEAMKR EREEAQKRLE EERLAEASAS QGNEARDEDV AIKAEHASKM AAKWEKIQQK 480
  481 EAKKAEKGKM PEKKTGNGAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 7.69897 Tropomyosin
    2 View Details [132..500] PSI-BLAST 12.154902 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle