YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE33887

General Information:
Name(s) found: CE33887 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00021882 Nicotinate phosphoribosyltransferase status:Confirmed UniProt:Q95XX1 protein_id:CCD83505.1 [WormBase]
  • gi|71997955|ref|NP_001023490.1| hypothetical protein Y54G2A.17 [Caenorhabditis elegans] [NCBI NR]
  • gi|30025066|gb|AAP13743.1| Hypothetical protein Y54G2A.17c [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Hypothetical protein Y54G2A.17c [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33887 WBGene00021882 status:Confirmed TR:Q86FN7 protein_id:AAP13743.1 [wormpep150.fasta]
  • 33887 WBGene00021882 status:Confirmed TR:Q86FN7 protein_id:AAP13743.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Confirmed TR:Q86FN7 protein_id:AAP13743.1 [wormpep115.fasta.reversed]
  • CE33887 WBGene00021882 status:Confirmed UniProt:Q86FN7_CAEEL protein_id:AAP13743.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33887 WBGene00021882 status:Confirmed UniProt:Q86FN7_CAEEL protein_id:AAP13743.1| [wormORF-contam.fasta]
  • Y54G2A.17c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33887 WBGene00021882 status:Confirmed UniProt:Q86FN7 protein_id:AAP13743.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE33887 WBGene00021882 status:Confirmed UniProt:Q95XX1 protein_id:CCD83505.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE33887 WBGene00021882 status:Confirmed UniProt:Q95XX1 protein_id:CCD83505.1 Nicotinate phosphoribosyltransferase [wormpep246-ecoli-contam.fasta]
  • Isoform of Q95XX1, Isoform c of Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans GN=Y54G2A.17 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 238 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridine nucleotide biosynthetic process [IEALink to PubMed article]
    nicotinate nucleotide biosynthetic process [IEALink to PubMed article]
    Molecular Function: nicotinate phosphoribosyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGQDSLVQP LLTDFYQITM CYAYWKTGTH NEPAVFDVFF RKNPFQGEFT VFAGLEDCLR  60
   61 FVENFKFSQS DIDYVKKILP ENAEPEFYEY LETLNGSHLT IEAVAEGSVV FPKVPLLTIN 120
  121 GPLAMCQLIE TSILNLVNYA SLVATNAARF RQASGWKIQL LEFGLRRAQG PNGGLTASKY 180
  181 CYIGGFDATS NVLAGKLYGI PVKGTQAHSF ICSFSSPAEV EHYLSIMGDF ALNSSLWF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] PSI-BLAST 72.154902 Crystal structure of Enterococcus faecalis putative nicotinate phosphoribosyltransferase, NEW YORK STRUCTURAL GENOMICS CONSORTIUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.074040936650541 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle