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Protein Overview: CE33885

General Information:
Name(s) found: CE33885 [WormBase]
Description(s) found:
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  • WBGene00021882 status:Partially_confirmed UniProt:Q95XX1 protein_id:AAP13741.1 [WormBase]
  • gi|71997947|ref|NP_500264.3| hypothetical protein Y54G2A.17 [Caenorhabditis elegans] [NCBI NR]
  • gi|30025064|gb|AAP13741.1| Hypothetical protein Y54G2A.17a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Hypothetical protein Y54G2A.17a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33885 WBGene00021882 status:Partially_confirmed TR:Q8WTL1 protein_id:AAP13741.1 [wormpep150.fasta]
  • 33885 WBGene00021882 status:Partially_confirmed TR:Q8WTL1 protein_id:AAP13741.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • status:Partially_confirmed TR:Q8WTL1 protein_id:AAP13741.1 [wormpep115.fasta.reversed]
  • CE33885 WBGene00021882 status:Partially_confirmed UniProt:Q95XX1 protein_id:AAP13741.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33885 WBGene00021882 status:Partially_confirmed UniProt:Q95XX1 protein_id:AAP13741.1| [wormORF-contam.fasta]
  • Y54G2A.17a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 543 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridine nucleotide biosynthetic process [IEALink to PubMed article]
    nicotinate nucleotide biosynthetic process [IEALink to PubMed article]
    Molecular Function: nicotinate phosphoribosyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGQDSLVQP LLTDFYQITM CYAYWKTGTH NEPAVFDVFF RKNPFQGEFT VFAGLEDCLR  60
   61 FVENFKFSQS DIDYVKKILP ENAEPEFYEY LETLNGSHLT IEAVAEGSVV FPKVPLLTIN 120
  121 GPLAMCQLIE TSILNLVNYA SLVATNAARF RQASGWKIQL LEFGLRRAQG PNGGLTASKY 180
  181 CYIGGFDATS NVLAGKLYGI PVKGTQAHSF ICSFSSPAEL KVRLLNHKIT NEKADLFQIS 240
  241 MEKRAWLLDQ FSWKAALSEV SDGELSAFVA YAIAFPDTFL ALIDTYDVIR SGVVNFVAVS 300
  301 LALHDLGYRS MGCRIDSGDL SYLSKELREC FVKVSTLKGE YKFFEKMSIV ASNDINEETI 360
  361 MSLNDQQHEI NAFGVGTHLV TCQKQPALGC VYKLVAQSAQ PKIKLSQDVT KITIPGKKKC 420
  421 YRIFGKNGYA ILDLMMLEDE PEPQPNQQIL CRHPFEVESK RALVNANKII KLHNVYWKDG 480
  481 EMITPLPTLN EIKEHVNESI RSTLRQDHRR YLNPTPYKVS VSERLYQFLH TLWLQNAPIG 540
  541 QLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..543] PSI-BLAST 136.0 Crystal structure of Enterococcus faecalis putative nicotinate phosphoribosyltransferase, NEW YORK STRUCTURAL GENOMICS CONSORTIUM

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nicotinate phosphoribosyltransferase activity
    		•  6.27751846600304 bayes_pls_golite062009
  • nicotinate-nucleotide diphosphorylase (carboxylating) activity
    		•  3.12788282156037 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  1.28938930256604 bayes_pls_golite062009
  • binding
    		•  0.653855264785782 bayes_pls_golite062009
  • catalytic activity
    		•  0.60409960326459 bayes_pls_golite062009
  • protein binding
    		•  0.317577842532028 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle