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Protein Overview: lst-3

General Information:
Name(s) found: lst-3 / CE33850 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00003085 locus:lst-3 status:Partially_confirmed UniProt:G5EBS4 protein_id:CAD89760.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 509 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    positive regulation of locomotion [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQFGGGKPP GQWHRPAAPG GAPQLSGFSA VNFGGVPMVG MGVPMGMVNQ AAFSSQGVLG  60
   61 MQGIMGAVPQ QSLPQQQPNF QQQNSLQQGT NMQQNSGAKN QRTFVGVVTK MLDTYGFVDD 120
  121 DVFFQHSVIR GSHPRVGDKV MVEANYNPSM PFKWNAYRIQ LLNAATQQEP ARQAPQQQQM 180
  181 HQPQRGGQES QRWGAAPASG TSDRADRNGG ARGNDSPLHR SSAARRHSPP PRRASPPRRT 240
  241 SSPKRDARPA REIRDSREPR EVRRSPPPRR AASPRKASSP SAPAKNDRKR ERSPSGSVAP 300
  301 SVRRESASPP RRRARIIPRY ECRAQKPALL SPIVSGSVLR HRYSKLYLPS DYVDLSFDWV 360
  361 RSFQLDLSLD LSNPIQFHVF NKDVDFIGEE EIQDLDPEDA DHRHQVKVLL LSHAGKSEVV 420
  421 KKAFCLMADG TTDDHQEPQS LLKNLHFLVG ARGKETMGIG GSWSPSQDGA DPNSATTMIR 480
  481 TAVRTTKSLT GIDLSSVSQW RKKAMLLPT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] deduced N/A No confident structure predictions are available.
    2 View Details [92..165] MSA 1.142992 View MSA. No confident structure predictions are available.
    3 View Details [166..357] MSA 7.150996 View MSA. No confident structure predictions are available.
    4 View Details [358..509] MSA 3.020972 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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