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Protein Overview: hsp-25

General Information:
Name(s) found: hsp-25 / CE33558 [WormBase]
Description(s) found:
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  • WBGene00002023 locus:hsp-25 status:Confirmed UniProt:Q86GU1 protein_id:CCD63802.1 [WormBase]
  • gi|71982755|ref|NP_001024375.1| Heat Shock Protein family member (hsp-25) [Caenorhabditis elegans] [NCBI NR]
  • gi|28894835|gb|AAO61437.1| Heat shock protein protein 25, isoform b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • Heat shock protein protein 25, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE33558 WBGene00002023 locus:hsp-25 status:Confirmed TR:Q86GU1 protein_id:AAO61437.1 [wormpep150.fasta]
  • 33558 WBGene00002023 locus:hsp-25 status:Confirmed TR:Q86GU1 protein_id:AAO61437.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:hsp-25 status:Confirmed TR:Q86GU1 protein_id:AAO61437.1 [wormpep115.fasta.reversed]
  • CE33558 WBGene00002023 locus:hsp-25 status:Confirmed UniProt:Q86GU1_CAEEL protein_id:AAO61437.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33558 WBGene00002023 locus:hsp-25 status:Confirmed UniProt:Q86GU1_CAEEL protein_id:AAO61437.1| [wormORF-contam.fasta]
  • Heat Shock Protein family member (hsp-25) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE33558 WBGene00002023 locus:hsp-25 status:Confirmed UniProt:Q86GU1 protein_id:AAO61437.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE33558 WBGene00002023 locus:hsp-25 status:Confirmed UniProt:Q86GU1 protein_id:CCD63802.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of Q17849, Heat Shock Protein OS=Caenorhabditis elegans GN=hsp-25 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 205 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of eye lens [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERRIDVNR SNYSVIDNEF GNMRDRFEQE MRRVEEEMKR LRSEFEGYRP NGGPPAAISN  60
   61 QPYNAYSNTS SHHETSNRTG GFGSPLPPPS FHGPSDLMAH RPTYDPYLDN LKSPLIKDES 120
  121 DGKTLRLRFD VANYKPEEVT VKTIDNRLLV HAKHEEKTPQ RTVFREYNQE FLLPRGTNPE 180
  181 QISSTLSTDG VLTVEAPLPQ LAIQQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..205] PSI-BLAST 19.30103 CRYSTAL STRUCTURE AND ASSEMBLY OF TSP36, A METAZOAN SMALL HEAT SHOCK PROTEIN


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle