Protein Overview: npp-9

General Information:
Name(s) found:	npp-9 / CE33525 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00003795 locus:npp-9 status:Confirmed UniProt:Q86G90 protein_id:CAD82919.1 [WormBase] gi\|32565674\|ref\|NP_871701.1\| Nuclear Pore complex Protein family member (npp-9) [Caenorhabditis elegans] [NCBI NR] gi\|29292180\|emb\|CAD82919.1\| C. elegans protein F59A2.1b, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] [wormpep104.fasta] CE33525 WBGene00003795 locus:npp-9 status:Confirmed TR:Q86G90 protein_id:CAD82919.1 [wormpep150.fasta] 33525 WBGene00003795 locus:npp-9 status:Confirmed TR:Q86G90 protein_id:CAD82919.1 [wormpep130-phg-ecoli-orf-rand.fasta] RanBP1 domain containing protein, Nuclear Pore complex Protein NPP-9 (95.6 kD) (npp-9) [Caenorhabditis elegans]gi\|29292180\|emb\|CAD82919.1\| Hypothetical protein F59A2.1b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] locus:npp-9 status:Partially_confirmed TR:Q86G90 protein_id:CAD82919.1 [wormpep115.fasta.reversed] CE33525 WBGene00003795 locus:npp-9 status:Confirmed UniProt:Q86G90_CAEEL protein_id:CAD82919.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE33525 WBGene00003795 locus:npp-9 status:Confirmed UniProt:Q86G90_CAEEL protein_id:CAD82919.1\| [wormORF-contam.fasta] Hypothetical protein F59A2.1b [Caenorhabditis elegans] [nr-271106-contam.fasta] F59A2.1b [Caenorhabditis elegans] [nr-271106-contam.fasta] CE33525 WBGene00003795 locus:npp-9 status:Confirmed UniProt:Q86G90 protein_id:CAD82919.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] Nuclear Pore complex Protein OS=Caenorhabditis elegans GN=npp-9 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	884 amino acids
Gene Ontology:
Cellular Component:	intracellular [IEA]
Biological Process:	collagen and cuticulin-based cuticle attachment to epithelium [IMP] hermaphrodite genitalia development [IMP ] intracellular transport [IEA] embryonic development ending in birth or egg hatching [IMP ] reproduction [IMP]
Molecular Function:	zinc ion binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDQKPNMGR IVASVVDVQQ LMTMQFDSLI KSMDSLKIEH QTGVTQLRDD IRRSEDRFQK  60
   61 QLSDLSTNHG KELERLHQII HTLLARDANP LGSMIPPQQL QQQQQMLILQ RQMEMAHVQA 120
  121 AQAQAHAHAQ AQAQAQAQSQ VMANLLNAAK PAIPVTQPLV ATTAQAKSTV PASGVIAPKT 180
  181 SPPEVVIPPA KPTFSTPTPA VVPKPATTGF SFGGTNPATS IFGKKPETAS PVVVPAAKDD 240
  241 EDEEHDEDYE PEGEFKPVIP LPDLVEVKTG EEGEQTMFCN RSKLYIYANE TKEWKERGTG 300
  301 ELKVLYNKDK KSWRVVMRRD QVTISEETLP SNIENGTEEL CWNIQVLKVC ANFPILGSMT 360
  361 IQQMKSNEKA YTWFCEDFSE DQPAHVKLSA RFANVDIAGE FKTLFEKAVA EAKSSSNAGK 420
  421 TIDKEIKPAA EVKKEVKQEV VIPSNNKPEE TGFGDQFKPK PGSWECPGCY VTCKADEIEC 480
  481 ACCGTSKDGS VKEKNIFSKP SILQPAPGTP KVTFGFGASA PAKEPLAQTS QFGGSLSGSP 540
  541 STSSSIFGGG TPKGTSVFGG GAANTPTFSF NKPAAAVNAT TPSFNFNNPA ASTASPATST 600
  601 TPGNSLFGGG LSKTESTASS TTTPSFMFAK NSESAFPKPT FSFGKQQTPS TTAPAKQEEN 660
  661 KQSETPKSVF GSGFTSGGAT FAALSANSAK SGSIFDAANV KKAQEELAAQ KKASIFGSKN 720
  721 TTLNTTSATS HDGDETNEDG DGEYEPEVEF KPVIPLPDLV EVKTGEEDEE VMFSARCKLY 780
  781 KYYSDLKENK ERGLGDIKLL KSNDNKYRIV MRREQVHKLC ANFRIEKSMK LSPKPNLPNV 840
  841 LTFMCQDFSE DASNADPAIF TAKFKDEATA GAFKTAVQDA QSKM

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	None Entered	No Comments	Cheeseman, I.M., et al. (2004)
View Run	hcp-1	hcp1 IP from december2004	Cheeseman, I.M., et al. (2005)
View Run	hcp-2	hcp2 ip from december	Cheeseman, I.M., et al. (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Protein Overview: npp-9

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: