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Protein Overview: nhx-6

General Information:
Name(s) found: nhx-6 / CE33115 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00003734 locus:nhx-6 Sodium\/hydrogen exchanger status:Partially_confirmed UniProt:Q9TZH0 protein_id:CCD71271.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 538 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    regulation of pH [IEALink to PubMed article]
    Molecular Function: solute:hydrogen antiporter activity [IEALink to PubMed article]
    sodium:hydrogen antiporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLIRRLSVV LIGLLLILGY AQAECDEKEE EVFPSRYPIA YFKWEEVKIP MTICLWLIAA  60
   61 SISKIVFNSI PHLNDLFPDS ALLIMIGLII GIIFKLIGVD KNQFFLESEI FMLYLLPPLV 120
  121 FDAGYFMPAR QFFDNFGSIM CFAMIGTLFN FLAISFSLWA ISLTGLFSVE TPLLHMLLFG 180
  181 SVAADVDPVA VIVIFEELAV NDVLFIAVFG ESLFNDGVSV VLYRMFLTFS EIGAENLIPE 240
  241 DFANGGVSFL VVVFGGVGIG VLFAFLASLL TKYSRAEEIS ILNCVFILIL PYTCYLCGEL 300
  301 FGLSSIIAVV FCGALMRQYC RENVEQETVK ATEKFIKVLS IASETVIFVF LGLSTVSSNH 360
  361 HWDTCFIVLT VVFCLIYRTL GVVVMCHFLN KYRLNKYTKV DQFIMAYGGL RGAIAYGLVV 420
  421 AIPDFIPAKN MFVTSCIIVI YFTVFLQGIT LKPIAEFLQV EKKNVHSKNM IEHIYTELID 480
  481 TTMAGMEDIA GFKGHHWIRD SWNYFNNCYL RPVLVNKNNM KQMDKTKLVR KYKVGLGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..167] MSA 4.972996 View MSA. No confident structure predictions are available.
    2 View Details [168..397] MSA 2.973982 View MSA. No confident structure predictions are available.
    3 View Details [398..463] deduced N/A No confident structure predictions are available.
    4 View Details [464..538] MSA 3.507994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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