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Protein Overview: CE33089

General Information:
Name(s) found: CE33089 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00018405 status:Confirmed UniProt:Q8MQ52 protein_id:CCD71191.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA metabolic process [IEALink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLQTENQL IGELKAPATT KKPTNRPAMQ IYRPPGLRSD GSSSTTAVTT TSSTKPKPAA  60
   61 GQKLSSSECD TNVNSQILKE ENNNKKDCGE STSSRASSRA SNHVSSDDRH SNGSLKRTES 120
  121 SLSSESTPSS QKSYGSNSNK LNGQHVSGGA HQQYNKRINS SKKENQKKKV MSEHEIEKAI 180
  181 TELRALQLHS HSIQIEQWIG GAFCDEELAE CIGSALCRHA IEGGGGSGVG KLCANFKYAP 240
  241 SIGSFVKGLI IALSQYLECR HKIREDHFRM WISFIQFLTE LYSNLGSDSK GELATIVFDV 300
  301 FNYLLRPPIL EHVKIQELEC LISILIKGGY DLERECPDRL ALLKDLIRDA FIDVSEPWAR 360
  361 KMILLLLELG ASGWKLPTDA NEYYFNETSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 4.39794 Fibrinogen
    2 View Details [159..390] PSI-BLAST 59.045757 Eukaryotic initiation factor eIF4G

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle