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Protein Overview: sdn-1

General Information:
Name(s) found: sdn-1 / CE32681 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00004749 locus:sdn-1 Syndecan status:Confirmed UniProt:Q8I4H9 protein_id:CAD44142.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: cytoskeletal protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILKLNFCLS TYSVLILLSL STQAFAANQA KTKVVPSSTI STKSLKNGIS EVEGSANIPG  60
   61 RLADIEVNGS GYPTDDEDGD DVHGSGKPPS SATTKSDKVT SPSHAVVTAK PTTVPTTTAS 120
  121 FKPPVQPKPK PAANDKEIKV EEDEDDDEDE DEDDEDDEED FADENIHNDE DFFTTTTTTT 180
  181 YRPIVVATTS TPRSAATNPP RQQPPMVTST ISSGPFSPFH ETLANGFYAA IAGGVLVAVI 240
  241 TAILLVLFVV FRIRKKDEGS YALDEPKQAR PYASYGYTKA STKEFYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] deduced N/A No confident structure predictions are available.
    2 View Details [141..287] MSA 11.108988 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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