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Protein Overview: wsp-1

General Information:
Name(s) found: wsp-1 / CE32573 [WormBase]
Description(s) found:
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  • WBGene00006957 locus:wsp-1 status:Confirmed UniProt:Q8MQE6 protein_id:CCD61397.1 [WormBase]
  • gi|32566548|ref|NP_741460.2| WASP (actin cytoskeleton modulator) homolog family member (wsp-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|26251680|gb|AAN84882.1| Wasp (actin cytoskeleton modulator) homolog protein 1, isoform b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE32573 WBGene00006957 locus:wsp-1 status:Partially_confirmed TR:Q8MQE6 protein_id:AAN84882.1 [wormpep150.fasta]
  • 32573 WBGene00006957 locus:wsp-1 status:Partially_confirmed TR:Q8MQE6 protein_id:AAN84882.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • actin cytoskeleton modulator WASP homolog (83.9 kD) (wsp-1) [Caenorhabditis elegans]gi|26251680|gb|AAN84882.1| Wasp (actin cytoskeleton modulator) homolog protein 1, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:wsp-1 status:Partially_confirmed TR:Q8MQE6 protein_id:AAN84882.1 [wormpep115.fasta.reversed]
  • CE32573 WBGene00006957 locus:wsp-1 status:Partially_confirmed UniProt:Q8MQE6_CAEEL protein_id:AAN84882.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32573 WBGene00006957 locus:wsp-1 status:Partially_confirmed UniProt:Q8MQE6_CAEEL protein_id:AAN84882.1| [wormORF-contam.fasta]
  • WASP (actin cytoskeleton modulator) homolog family member (wsp-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Wasp (actin cytoskeleton modulator) homolog protein 1, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE32573 WBGene00006957 locus:wsp-1 status:Partially_confirmed UniProt:Q8MQE6 protein_id:AAN84882.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32573 WBGene00006957 locus:wsp-1 status:Confirmed UniProt:Q8MQE6 protein_id:CCD61397.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • WASP (Actin cytoskeleton modulator) homolog OS=Caenorhabditis elegans GN=wsp-1 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 781 amino acids

    Gene Ontology:
    Cellular Component: cell cortex [IDALink to PubMed article]
    Biological Process: morphogenesis of embryonic epithelium [IMP]
    epithelial cell migration [IMP]
    regulation of Arp2/3 complex-mediated actin nucleation [IDA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWMVVSEDPA GRLRYQYHNL PVAQSFPPPS HPPPPSATTN PSSNKPSTVS SAAQIYSSFP  60
   61 SSTSSSGTGG HLHHNHMQRF ARGGCSSFPD SMGSSPRTTH RSHTLPNGGY YEMEQYDNVN 120
  121 DYSTYGGPDS TSSSTSSSAE YQDPVYSTRY GGSTGTYARR QNYARCYVPI SADAFYYYHN 180
  181 QQKQLQQQHH QQQQQQLAFR PRHRSSHHHQ EPRRHRAPSP DPDYSPPLSR NKVRFHIPEE 240
  241 PVSRGDYVSS RHVFNTDDFG DEDDDYESVS MNPDPAPHSD SVLVHRSNGQ VSVMVTKKEE 300
  301 PIYCSGGSDS STESSSATPS SVEADTPPPI PSHPPARHRL VKKSSSSTSI SLNGIGSTPT 360
  361 RQFEITQAYG GTIRGPPMAI GGGQGITQMG TMAAAPQSHT HTDGNASSSG SWFRKDKNKK 420
  421 KDKKSKIKKE DISNPTNFQH KAHVGWNQDS GFSNTVYDDD MDEATKNILK AAGLESNNLN 480
  481 EDDKKFVKKF IAKNYDKYVS VGSLDPSQIS SPLPPPIQQH PQMNQSWNQT PVRQYKPSFP 540
  541 SSAPIGSGAS SYSTPAAPPP PTRVESHGLA PARPPPPPPS SGTRGIAPSR PLPQAPNYGT 600
  601 PENRPHAVPP PPPPPPPQSF GMAPISSAAP PPPPPPPPMG LPAVGAGAPP PPPPPPPSGA 660
  661 GGPASVLAKL PPAQDGRSNL LAEIQAGKQL RSVQQTADSP KSAGGDARGD VMAQIRQGAQ 720
  721 LKHVDAAAEQ ERRKSTTSGA AGMGGLAGAL AKALEERRMN MGIDDTSDDD DDEDDKNEWS 780
  781 D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] deduced N/A No confident structure predictions are available.
    2 View Details [155..345] MSA 2.155996 View MSA. No confident structure predictions are available.
    3 View Details [346..542] PSI-BLAST 6.0 SOLUTION STRUCTURE OF CDC42 IN COMPLEX WITH THE GTPASE BINDING DOMAIN OF WASP
    4 View Details [543..703] MSA 3.209997 View MSA. No confident structure predictions are available.
    5 View Details [704..781] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle