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Protein Overview: sop-2

General Information:
Name(s) found: sop-2 / CE32334 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00004945 locus:sop-2 Polycomb protein sop-2 status:Partially_confirmed UniProt:Q965H3 protein_id:CAM36334.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 735 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: oviposition [IMPLink to PubMed article]
    Molecular Function: identical protein binding [IPI]
    enzyme binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSNLTSNEM SSTSAIVEPP EAVKGNERDK STRRSTSQVV RPEKHEVENA LEDQCSSSSL  60
   61 PKEAQYYAKL DKKLEGKDPR SQFYEAVRLS ADIFAHKFEK AVCSRQTFEP TNSIIKVLNT 120
  121 AEEEMLHEKV VPLPVSSKLQ YYLNRGRYDT IFDRDEQLQR TADPMADEPD HVEKRVTSIL 180
  181 EQASREMEEG EVEPVFYDGS DEDQELPIDL GAMRNLQRTN KFAARSSRMA ARRGGRPGYR 240
  241 GAFRGAARGA PSRRPAPAAE VAPETPVAAP MAPAAPAAPA TPEAAPAAEV MDTSIATEMP 300
  301 QESAVDLSNV SAATEMDTSK EGEASRPTSE KKKKIRTTEM DRLMSMDLGP KDGGRVGELG 360
  361 HMWPESRRRP AAPLPETPAA QPRKSLPRRA AEKKKPEDSD AAEEQEVEME VDNDASTSTP 420
  421 RNARGGRGGG NRRGSRRGQK RTSGGSGKLV EPKKEPVDEP AEKIPKRSEA APEVPATATT 480
  481 KEAPPSTSSS PPDAPATPAT PASSDSRDSP RKIRAMIFSL TGSPPESETP PVLQQEQVIS 540
  541 TAAPTAGRHP NIIQQVPHIN RIPPQPLRRL TAPQAPPASQ PEEPPVQQTV PVVKVELASA 600
  601 PAPIVRDPQS TEPVPPAMPT LVENNHEATL ILPPNKTSDY TRWNAQDLIN WVRLLITNNV 660
  661 DSTIAIMVRE EFDGETLACL VLDDDFRKEV PIPYGHYKKM KIYGTEVLNH YRTEKYQADL 720
  721 RKFHEELAAW KAQQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..254] deduced N/A No confident structure predictions are available.
    2 View Details [255..462] deduced N/A No confident structure predictions are available.
    3 View Details [463..642] MSA 3.186996 View MSA. No confident structure predictions are available.
    4 View Details [643..735] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle