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Protein Overview: CE32279

General Information:
Name(s) found: CE32279 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00013574 locus:lron-13 status:Partially_confirmed UniProt:Q9XWD2 protein_id:CAA21743.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 782 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFRSSIIPL IRLLLLPYII SGLTTCPRQC ICHEHSIACS CETSEKPELI ISSLGSTYIT  60
   61 SLVVHTCDKV TVQNGSFAGV VLVERLSFIA IGRLYFEPHA FKDILQSPRQ LVIDECTISS 120
  121 LAPVSFAGLS HIDHLWFRNS RIDVIATEAF HYLTNIDYIY FHKTKIGRIE RKAFSKMYQI 180
  181 DHLYFKDSIE IATIESEAFS GSQVDEMIFD GVTVETAHDT FLLNVESDMA ILKNCSIYLI 240
  241 PRKEDDMVVF DEKQKIIERC LIESSSFNIM SPYKLGCNVL EVTSSVIQRI GPVSRDIDTP 300
  301 VFRPEPFIIS SLNSVIFSNC SIGSVDSFAF TNYTLSILSF NHSRIGEMKT RTIEKSKISN 360
  361 FEFGGSTVKL CNSSSIDKSK IQNFEVSGAE IDRINSDWIQ NSMIRKLKIR SSKIGKSEKN 420
  421 IFKDSVFEEV EIDGNRILMM DSETLHGDNQ ISTLRITGND ITTSRPSPSF LSSSPQSHPS 480
  481 NFILANNTFD CLPNDCSTNS FLLNSPKHSP LLYKISSNRC RPPLENPCVE PRSISLEDHG 540
  541 ITCRISSLVA DCACLTEKSS IPSKFPLNYN ISVVILGDCE HLTIDQKLAD FTQIYIFRTT 600
  601 KLIVQRLPKS LKVLKIFHST VTLEPSSFLN FPQDWEVSNS KVEHLGLSNL NISSLHLKFS 660
  661 RISHISAAKN SKIKNLHIEN CHLESTQHLF EISQTLQMHN SIIFSSPRGL GTISSAQLQN 720
  721 NTLLECCNLI ELDSRCDLHF FGSRCVEEDD VSTNHLPITS GSNITSFDVY IAIYLFVSRI 780
  781 LL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..720] PSI-BLAST 45.0 The molecular structure of toll-like receptor 3 ligand binding domain
    2 View Details [721..782] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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