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Protein Overview: CE32131

General Information:
Name(s) found: CE32131 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00015943 locus:tiar-1 status:Confirmed UniProt:Q8IG49 protein_id:CCD65019.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 295 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: morphogenesis of an epithelium [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    mRNA processing [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVNWAVEPG QQQSKIDTTR HFHVFVGDLS SEVDNQKLRE AFQPFGDVSD AKVIRDTNTT  60
   61 KSKGYGFVSY PKREEAERAI EQMNGQWLGR RTIRTNWATR KPGDQEKPSH YNEKSYDEIY 120
  121 NQTSGDNTSV YVGNIASLTE DEIRQGFASF GRITEVRIFK MQGYAFVKFD NKDAAAKAIV 180
  181 QMNNQDVGGQ LVRCSWGKTG DTGKTPGGSY GYGYGNSSSG GNSQPYSGYG GGGAYGGGQG 240
  241 GGGHGGPGQQ QSNANSQYWQ YYAQYYNNPQ LMQQWSNYWQ QQGGAPQQQN SGGHQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..214] PSI-BLAST 42.0 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
    2 View Details [215..295] MSA 1.402996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle