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Protein Overview: CE32083

General Information:
Name(s) found: CE32083 [WormBase]
Description(s) found:
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  • WBGene00022852 Probable RNA 3'-terminal phosphate cyclase-like protein status:Confirmed UniProt:Q23400 protein_id:CCD73717.1 [WormBase]
  • gi|32564710|ref|NP_495445.2| hypothetical protein ZK1127.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|2500650|sp|Q23400.2|RCL1_CAEEL RecName: Full=Probable RNA 3'-terminal phosphate cyclase-like protein [NCBI NR]
  • gi|24418241|gb|AAB93426.2| Hypothetical protein ZK1127.5 [Caenorhabditis elegans] [NCBI NR]
  • Probable RNA 3'-terminal phosphate cyclase-like protein OS=Caenorhabditis elegans GN=ZK1127.5 PE=3 SV=2 [Swiss-Prot]
  • [wormpep104.fasta]
  • CE32083 WBGene00022852 status:Confirmed SW:Q23400 protein_id:AAB93426.2 [wormpep150.fasta]
  • 32083 WBGene00022852 status:Confirmed SW:Q23400 protein_id:AAB93426.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • probable rna phosphate cyclase-like protein (41.6 kD) (2H339) [Caenorhabditis elegans]gi|24418241|gb|AAB93426.2| Hypothetical protein ZK1127.5 [Caenorhabditis elegans]gi|2500650|sp|Q23400|RCL1_CAEEL Probable RNA 3'-terminal phosphate cyclase-like protei [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed SW:Q23400 protein_id:AAB93426.2 [wormpep115.fasta.reversed]
  • CE32083 WBGene00022852 status:Confirmed UniProt:RCL1_CAEEL protein_id:AAB93426.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE32083 WBGene00022852 status:Confirmed UniProt:RCL1_CAEEL protein_id:AAB93426.2| [wormORF-contam.fasta]
  • Probable RNA 3'-terminal phosphate cyclase-like protein [nr-271106-contam.fasta]
  • Hypothetical protein ZK1127.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • ZK1127.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE32083 WBGene00022852 status:Confirmed UniProt:Q23400 protein_id:AAB93426.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE32083 WBGene00022852 status:Confirmed UniProt:Q23400 protein_id:CCD73717.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE32083 WBGene00022852 status:Confirmed UniProt:Q23400 protein_id:CCD73717.1 Probable RNA 3'-terminal phosphate cyclase-like protein [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 379 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    oviposition [IMPLink to PubMed article]
    cytokinesis [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: RNA-3'-phosphate cyclase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSETLEFSG CNFFRIRLAY SILSGRPIRI INIRKNDDRP GIRDFESKLI GLLEKVTNGT  60
   61 KVEISRTGTQ VIFRPGMITG GVVNLDCGTE RCISYFLEPL LLLSPFCKVP MVIKLKGVTN 120
  121 APGEISVDGM KASWLKVYNK FVLNDEKLDI KIQARGLKPE GGGVVVFTAP IVKTLRPVKR 180
  181 QQVGKVCKIR GQAYVTKVTP SLAYRMIDAA KKAMHGYISD VYITVDQRKG DAGGASPGYG 240
  241 LFLTAETTEG VIYQAEAISR PKGESGVPIL PEDIGIEAGH ALLQQIYMGG ALDSSAQILA 300
  301 STFMTLCPKD VSHFLYGPLP MYSVHALRHL KQFFEIEFKM EDFKKTLKEE EADLKTGSAD 360
  361 KAMVTAVGVG YSNLNKTIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..379] PSI-BLAST 97.69897 RNA 3'-terminal phosphate cyclase, RPTC, insert domain; RNA 3'-terminal phosphate cyclase, RPTC

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.54689525592227 bayes_pls_golite062009
  • transferase activity
    		•  1.7007536630883 bayes_pls_golite062009
  • transferase activity, transferring alkyl or aryl (other than methyl) groups
    		•  1.24131488513793 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle