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Protein Overview: CE31558

General Information:
Name(s) found: CE31558 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00010704 status:Partially_confirmed UniProt:Q21374 protein_id:CAA90614.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    DNA binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKSRVWDYF LKLQDGRNKC NLCNKILARG SRGSTHNLIS HLTRVHPKEY VLQEEPPVMI  60
   61 AQEDSSEFSF QSNNMKTEDF TMQSFFEPEF MKLYNDNNIT KSIMEMICMD SMPMTTTDRA 120
  121 GFKRFMTSVC PDYELKSPSS MISYELPKLY QEYEDQLRME LNLAEHVVLS VDIWSDKGSI 180
  181 QEMIGVTGNF LKNEKVVRRT IGVINYQKDV HNGVYVAAEL DNLMARFNLN GKVEVVCRDY 240
  241 NSIVENACDH LKISSVNCFN QQLHLAACEA KSKIGQINRV LLNCKLLVKN LKNSSVTWQT 300
  301 SEKIQSLMEI PNLCLNHCSD ECWCFLQEFF GRVIECQQVI EELQKLQSSD WDLMRDVVEI 360
  361 LAPLSKFSKL SESKESSASV IIPYCDYLVK AYESTQNQPE AFLAVKEHME RELHKYTSCQ 420
  421 YLKFSTLLDP RYKDLYTNDS DTSNLIKAIE TEFETMDYKN RTFEEISSEL CGPAPKSQKL 480
  481 DFDAYIQEKI KSRGKHNALT GEKLTVRMEV TRYLSTAVED VTPRDFWLND VTKASYPRLA 540
  541 KFARRFIICP TGSSAAEKLF STDRATMDEY RNTLSDENLK MLIFLNKNIS SMTDLEFETE 600
  601 RDLHD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] FFAS03 2.99 No description for 2djrA was found.
    2 View Details [68..605] PSI-BLAST 41.69897 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle