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Protein Overview: htp-1

General Information:
Name(s) found: htp-1 / CE31692 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00002032 locus:htp-1 status:Partially_confirmed UniProt:Q20305 protein_id:CCD71103.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 352 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: chromosome segregation [IMPLink to PubMed article]
    mitosis [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLETIYDE SLNKSADSID DKKWSKLFPR IVSDPDRSSN FMTRAIYVAF SAVLRNRNIL  60
   61 GQEYFTKNYI TEKLKCMTLC FRNPRSNQIA QLLRNAGDAT KDGFLKEVSL VITNNEGDLE 120
  121 AIEVFSMKFI YFENGGVVAR LSTDKNGQED PHFAKLAQLV YEGGDSVRDQ MVTIVRSVQF 180
  181 LCTKVLEPLP EEFTANFRLE YTNDAPSNFR IDGFEDSSTF YTLPDDIQSA TIGHLRPGCH 240
  241 AANMECWSML MSDSYEAELT LKRHLDKVSD RHGFNPVNVL YKSFNSEDSD TSLSQATTES 300
  301 VNDQGGNETS PVDDITESLE KAQMSPIQTR PTTRRGADGS KTRSSPYSRS CK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] PSI-BLAST 49.522879 The Mad2 spindle checkpoint protein possesses two distinct natively folded states
    2 View Details [260..352] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.788773925855371 bayes_pls_golite062009
  • protein binding
    		•  0.475608160874066 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle