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Protein Overview: rps-21

General Information:
Name(s) found: rps-21 / CE30779 [WormBase]
Description(s) found:
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  • WBGene00004490 locus:rps-21 40S ribosomal protein S21 status:Confirmed UniProt:P49197 protein_id:CCD70740.1 [WormBase]
  • gi|25151735|ref|NP_498579.2| Ribosomal Protein, Small subunit family member (rps-21) [Caenorhabditis elegans] [NCBI NR]
  • gi|20901966|gb|AAC48297.2| Ribosomal protein, small subunit protein 21, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|1350962|sp|P49197.1|RS21_CAEEL RecName: Full=40S ribosomal protein S21 [NCBI NR]
  • 40S ribosomal protein S21 OS=Caenorhabditis elegans GN=rps-21 PE=1 SV=1 [Swiss-Prot]
  • [wormpep88.fasta]
  • CE30779 WBGene00004490 locus:rps-21 Ribosomal protein S21 status:Confirmed SW:P49197 protein_id:AAC48297.2 [wormpep150.fasta]
  • 30779 WBGene00004490 locus:rps-21 Ribosomal protein S21 status:Confirmed SW:P49197 protein_id:AAC48297.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ribosomal Protein, Small subunit (9.7 kD) (rps-21) [Caenorhabditis elegans]gi|20901966|gb|AAC48297.2| Ribosomal protein, small subunit protein 21 [Caenorhabditis elegans]gi|1350962|sp|P49197|RS21_CAEEL 40S ribosomal protein S21 [nrdb_11152004_Chlamydomonas]
  • locus:rps-21 Ribosomal protein S21 status:Confirmed SW:P49197 protein_id:AAC48297.2 [wormpep115.fasta.reversed]
  • CE30779 locus:rps-21 Ribosomal protein S21 status:Confirmed [wormpep80.hongbin]
  • CE30779 WBGene00004490 locus:rps-21 Ribosomal protein S21 status:Confirmed UniProt:RS21_CAEEL protein_id:AAC48297.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE30779 WBGene00004490 locus:rps-21 Ribosomal protein S21 status:Confirmed UniProt:RS21_CAEEL protein_id:AAC48297.2| [wormORF-contam.fasta]
  • 40S ribosomal protein S21 [nr-271106-contam.fasta]
  • Ribosomal protein, small subunit protein 21 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Ribosomal Protein, Small subunit family member (rps-21) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE30779 WBGene00004490 locus:rps-21 Ribosomal protein S21 status:Confirmed UniProt:P49197 protein_id:AAC48297.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE30779 WBGene00004490 locus:rps-21 Ribosomal protein S21 status:Confirmed UniProt:P49197 protein_id:CCD70740.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE30779 WBGene00004490 locus:rps-21 status:Confirmed UniProt:P49197 protein_id:CCD70740.1 40S ribosomal protein S21 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 88 amino acids

    Gene Ontology:
    Cellular Component: ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNDAGQTVE LYVPRKCSSS NRIIGPKDHA SVQIDFVDVD PETGRMIPGK STRYAICGAI  60
   61 RRMGESDDAI LRLAQKDGLV PRDDVKSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] Pfam 65.124939 No description for PF01249.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle