Protein Overview: vps-45

General Information:
Name(s) found:	vps-45 / CE30898 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00016643 locus:vps-45 status:Confirmed UniProt:Q8MQA4 protein_id:CCD63973.1 [WormBase] gi\|25147985\|ref\|NP_741715.1\| related to yeast Vacuolar Protein Sorting factor family member (vps-45) [Caenorhabditis elegans] [NCBI NR] gi\|21392665\|gb\|AAM51527.1\|U41030_5 Hypothetical protein C44C1.4b [Caenorhabditis elegans] [NCBI NR] [wormpep88.fasta] CE30898 WBGene00016643 status:Confirmed TR:Q8MQA4 protein_id:AAM51527.1 [wormpep150.fasta] 30898 WBGene00016643 status:Confirmed TR:Q8MQA4 protein_id:AAM51527.1 [wormpep130-phg-ecoli-orf-rand.fasta] vacuolar protein sorting 45A (15.4 kD) (XB590) [Caenorhabditis elegans]gi\|21392665\|gb\|AAM51527.1\| Hypothetical protein C44C1.4b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] status:Confirmed TR:Q8MQA4 protein_id:AAM51527.1 [wormpep115.fasta.reversed] CE30898 WBGene00016643 locus:vps-45 status:Confirmed UniProt:Q8MQA4_CAEEL protein_id:AAM51527.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE30898 WBGene00016643 locus:vps-45 status:Confirmed UniProt:Q8MQA4_CAEEL protein_id:AAM51527.1\| [wormORF-contam.fasta] CE30898 WBGene00016643 locus:vps-45 status:Confirmed TR:Q8MQA4 protein_id:AAM51527.1 [wormpep160-contam.fasta] Hypothetical protein C44C1.4b [Caenorhabditis elegans] [nr-271106-contam.fasta] related to yeast Vacuolar Protein Sorting factor family member (vps-45) [Caenorhabditis elegans] [nr-271106-contam.fasta] CE30898 WBGene00016643 locus:vps-45 status:Confirmed UniProt:Q8MQA4 protein_id:AAM51527.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE30898 WBGene00016643 locus:vps-45 status:Confirmed UniProt:Q8MQA4 protein_id:CCD63973.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] Isoform of H2KYN0, Related to yeast Vacuolar Protein Sorting factor OS=Caenorhabditis elegans GN=vps-45 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	132 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	vesicle-mediated transport [IEA] vesicle docking during exocytosis [IEA] reproduction [IMP]
Molecular Function:	NONE FOUND

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MDLVQSSRKL IQDMIQLAGS QMKLLLMDGE TTPTVSCAFA QSEVMQKEVY IFDRIENKTS 60 61 SENIKNLKCV VFVRPTPKNI ERLVKELQEP RFSQYYLYFT NTINKYDVKR LAEADKNETI 120 121 PKVFTELQKS GR

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..132]	PSI-BLAST	35.0	Neuronal Sec1, NSec1

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle