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Protein Overview: spp-10

General Information:
Name(s) found: spp-10 / CE31323 [WormBase]
Description(s) found:
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  • WBGene00004995 locus:spp-10 status:Confirmed UniProt:Q18276 protein_id:CCD64009.1 [WormBase]
  • gi|25149982|ref|NP_741465.1| SaPosin-like Protein family member (spp-10) [Caenorhabditis elegans] [NCBI NR]
  • gi|21913097|gb|AAB37549.2| Saposin-like protein family protein 10, isoform b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE31323 WBGene00004995 locus:spp-10 status:Confirmed TR:Q18276 protein_id:AAB37549.2 [wormpep150.fasta]
  • 31323 WBGene00004995 locus:spp-10 status:Confirmed TR:Q18276 protein_id:AAB37549.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • prosaposin precursor (48.5 kD) (4J243) [Caenorhabditis elegans]gi|21913097|gb|AAB37549.2| Saposin-like protein family protein 10, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:spp-10 status:Confirmed TR:Q18276 protein_id:AAB37549.2 [wormpep115.fasta.reversed]
  • CE31323 WBGene00004995 locus:spp-10 7TM chemoreceptor, spp family status:Confirmed UniProt:Q18276_CAEEL protein_id:AAB37549.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE31323 WBGene00004995 locus:spp-10 7TM chemoreceptor, spp family status:Confirmed UniProt:Q18276_CAEEL protein_id:AAB37549.2| [wormORF-contam.fasta]
  • CE31323 WBGene00004995 locus:spp-10 7TM chemoreceptor, spp family status:Confirmed TR:Q18276 protein_id:AAB37549.2 [wormpep160-contam.fasta]
  • SaPosin-like Protein family member (spp-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Saposin-like protein family protein 10, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE31323 WBGene00004995 locus:spp-10 7TM chemoreceptor, spp family status:Confirmed UniProt:Q18276 protein_id:AAB37549.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE31323 WBGene00004995 locus:spp-10 7TM chemoreceptor, spp family status:Confirmed UniProt:Q18276 protein_id:CCD64009.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE31323 WBGene00004995 locus:spp-10 status:Confirmed UniProt:Q18276 protein_id:CCD64009.1 [wormpep246-ecoli-contam.fasta]
  • SaPosin-like Protein family OS=Caenorhabditis elegans GN=spp-10 PE=1 SV=3 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 429 amino acids

    Gene Ontology:
    Cellular Component: lysosome [IEALink to PubMed article]
    Biological Process: lipid metabolic process [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYFILTLAV LGSTLAYSKQ NMLDTNRVQA EVIENSSCEE CENVIKRISE AAKDPKKIEE  60
   61 LKIVLGMMCR ETSYADECRL FVSQLDKFID KLQPFLKNPH AVCTRLHICS NKKIDSFRRI 120
  121 LLEFAKRAQK TFDAPAIVCD ECQFVVKELK TVVEDKKSQA EARDFLRENV CKSLGQYRGF 180
  181 CDLVVDEYLP QFIQELDAIL QDPHQVCVDI KACNSASAQG LKARKYVEAS NEEKEKVENE 240
  241 VDAFWNGAAM KNNKGQTLAM SCFECKFVVE DMQTDMITNR KKLSDDVRDF ACYKIVTANM 300
  301 TDSCIDFLDL YLPTVIQMTV EQATPQGVCL ANKCCPASSV APLRDFTFQE IQAEKCPKMM 360
  361 ELETYLSSNL VGSAMEKFFE NSLTETFCSG LLSFFQPSCQ QIMSSVAPRF VSLTAVLASQ 420
  421 NKFSQAMNC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..232] PSI-BLAST 44.69897 (Pro)phytepsin; Plant acid proteinase, phytepsin
    2 View Details [233..334] PSI-BLAST 16.0 Saposin C
    3 View Details [335..429] MSA 2.094991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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