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Protein Overview: ttll-4

General Information:
Name(s) found: ttll-4 / CE29940 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00014232 locus:ttll-4 Tubulin polyglutamylase ttll-4 status:Partially_confirmed UniProt:Q09647 protein_id:CAA87425.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 601 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEALink to PubMed article]
    Molecular Function: tubulin-tyrosine ligase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGYSSAPS VSHTSSDTDL NRIDSYDDGA EETTDEQRMC GLSELVTSCL TSSRLKAIDE  60
   61 EDEEENCNDI EIVGLSKTTT KVKRSKKVLS CPIVSSSTKK ENGNAAPFLK SSQFTDVPPT 120
  121 IRFYTKGTKV TKPARKIQAR LTWCHNSLLP IVMRQTLAAS HFTVVDESLF YVGYWGRHLK 180
  181 SAQYRALQPH QKVNHFPGAF HIGRKDRLWM HIRKQQERFE GEFDIMPFTY ILPTDRQELL 240
  241 KYLETDASRH VIVKPPASAR GTGISVTRKP KDFPTTATLV AQHYIERPLT INRAKFDLRL 300
  301 YAYVPTFEPL RVYIYDQGLV RFASVPYSHS VSTISNKYMH LTNYSINKLA EADGVANKPV 360
  361 PKWTLHHLWE HFDEMGVDRE KIQREIEEVI IKAFISTEKP IREHMSRFLE QEFICYELFG 420
  421 IDIILDEDYK PWLLEVNISP SLHSGTPLDV SVKAPLAKDV LNLAGVYVPP SFDKLSDADY 480
  481 STRPRNGRKN REQLIKEASW VAAYKDQLGV IDNRIFKRLT PEDTRALVEF EDELERIGDF 540
  541 KLVFPTAHTS HYQKYFAETI YMNILLQQWQ IAQEDDRSIG INRLEQLCRQ KHMQSDQETS 600
  601 F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..484] FFAS03 1.6 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    2 View Details [485..601] MSA 3.139989 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.76250499250332 bayes_pls_golite062009
  • ligase activity
    		•  0.536538669306655 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle