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Protein Overview: stim-1

General Information:
Name(s) found: stim-1 / CE30055 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00021910 locus:stim-1 Stromal interaction molecule 1 status:Confirmed UniProt:G5EF60 protein_id:CCD73858.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: collagen and cuticulin-based cuticle attachment to epithelium [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRVSWIIAL YLTINVVIVV NGDRVTRNVE VTAEEEKIRD KLGYEAIRDI HRDMDDDHSG  60
   61 SIDRNESTGF MKEDMQMRGS ERTRRENKFH GDDDAITVDD LWEAWFESIE RTWTNERLVE 120
  121 WLINDVNLPS IVEAVKAKKI DGKILPRFAS PNSDFLNKEL GIKSSVYRQK LRLNSLDVVL 180
  181 FGYKDNNNRT KDILLAFLAL LLTSLIFLYV RQKQKAQQKV NELSNKLTEL KCMETEFEDV 240
  241 QKMLNDERSK RSISDGVVNH TEMENLRVQL EEAERRLEAN SNGSQAPLAL QPLLRRTCEN 300
  301 EMAFLEKQRQ DCFKEMKEAI EMVDRLQKKQ GSVLSSLKLA TGAASTSDQV DSKIFALKSR 360
  361 MEKIHTLTRE TQERWLQIES LCGFPLLYLN GSSSSGSISN AHSNPNAVNS NFVKKVSPPI 420
  421 PPSQQTANLR FVPTEQSDSI HSEDTSPIVE DVAISRSLTQ DLAEADMQSI VSGSTNGSGS 480
  481 VAALKKRKGI FPKLFRRNTS KSSSLGGTSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] deduced N/A No confident structure predictions are available.
    2 View Details [128..510] PSI-BLAST 17.69897 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.24

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle