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Protein Overview: CE30570

General Information:
Name(s) found: CE30570 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00021502 status:Confirmed UniProt:O76726 protein_id:CCD64383.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 635 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: rRNA processing [IEALink to PubMed article]
    Molecular Function: rRNA (uridine) methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPPKKNDLD GNPVNLFSEK EIKDYYNDFI FDFNTCTELP QFLAGNPDYE FSKQTNRLTQ  60
   61 AAMEIRKIKD KDLYDQHTDM MHDFARNPRI LQNYFICKNK AFLKLCEIFE VFKFDIFEGS 120
  121 SISSFHLCEG PGYFIEAVHV ALMRSRGKNE EMSYWKWGAN TLNPYFENRS CFDKLIDDSH 180
  181 IRPTMDQWYF GPSDDGDIEK FTEEYLIKQK LAGTFDLVTA DGSTNTQGKE GEIESIVSSL 240
  241 ISAEVEVALK LLRRNGRLIL KTYRFCAKST RDVMNLLADN FSSIKAIKPM ASRPGSSERY 300
  301 IVCDGFGGSM NMDISMLLQC DEFFVYKQID RIELHLKTFI EHHRMYLKDN WNSFLKTMKD 360
  361 KSFTAESRYF CRELQSMFPS GSSRSSSPWM RLYGHNLIRR NNPEDLKISI NRYILTADIF 420
  421 DPDYQKLDVE QIVARIMDQE EILTTSDIQL RTIDSLFVDP IALKQMLSHN SKIYYDLLEK 480
  481 VSTKNSADEC DWRKNFSNSN RNYTLKLDTN VTIEHILAAI SEGFDNYMES FTLTNLPQIT 540
  541 PPLFLSRISG SMYALLYTIF DKCETRPREI CWSGWKGHMT GRTLIARIRL EIAKCKPGTS 600
  601 IRCFVPMDIF DDFFTRICYR NVVHMTVVSN MCKEN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..354] PSI-BLAST 39.09691 Structure of the dengue virus 2'O methyltransferase in complex with s-adenosyl homocysteine and ribavirin 5' triphosphate
    2 View Details [355..532] PSI-BLAST 6.522879 No description for 2j7uA was found.
    3 View Details [533..635] MSA 1.026945 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle