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Protein Overview: CE30188

General Information:
Name(s) found: CE30188 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00020682 Inosine-5'-monophosphate dehydrogenase status:Confirmed UniProt:Q9GZH3 protein_id:CCD62017.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 534 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: GMP biosynthetic process [IEALink to PubMed article]
    nucleotide metabolic process [IEALink to PubMed article]
    Molecular Function: GMP reductase activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    IMP dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPEDFNSL ELDNSLTDGE TVHEMMAHKA GLTYNDFNIL PGFINFGVHD VSLETNITKD  60
   61 LKIKAPLVSS PMDTVTESGM AIVMALYGGI GIIHGNFPKP EDQAAEVLKV KRFKQGYVMQ 120
  121 PHCLSRDSTA FDMIQIKKKY GYTGAPVTED GRVGSKLIGM VTSRDFDFIT MDVAGQKGTP 180
  181 ISDTNDVTPT TPITRIMVSV DQLHLGHIND APELSQKKLK EHRLGKLPIV NDNGELCALL 240
  241 CRSDLLKARD YPMASYDSKG QLLCGAAVNT RGESQYTVDR VVEAGVDVLI IDSSNGSSTY 300
  301 QISMLRYIKE KHPHVQVIAG NVVTRAQAKL LIDQGADGLR IGMGSGSICI TQDVMAVGRA 360
  361 QGTAVYDVAR YANQRGIPIV ADGGIRDVGY ITKAISLGAS AVMMGGLLAA TTEAPGEYFW 420
  421 GPGGVRVKKY RGMGSLDAME AHASSQDRYF TAESDQIKVA QGVSATMKDR GSCHKFIPYL 480
  481 IRGVQHGMQD IGVRSLRDFR EKVDNGIVKF ERRSTNAQLE GGVHSLHSFE KRLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..534] PSI-BLAST 109.0 Inosine monophosphate dehydrogenase (IMPDH)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • IMP dehydrogenase activity
    		•  2.02048863053452 bayes_pls_golite062009
  • binding
    		•  0.964202692685807 bayes_pls_golite062009
  • transporter activity
    		•  0.961062314616209 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.807029018941177 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.640881170978843 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.525366315833255 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.440262824681055 bayes_pls_golite062009
  • protein binding
    		•  0.22179604283012 bayes_pls_golite062009
  • catalytic activity
    		•  0.181756622780318 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.0973526732376297 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle