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Protein Overview: ipla-1

General Information:
Name(s) found: ipla-1 / CE29816 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00019747 locus:ipla-1 status:Confirmed UniProt:Q8WQE0 protein_id:CCD70553.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 753 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: metal ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTKDADLS RPSGLPSNGN PGSSTTVPPA SKSGPVAPPR PSGTPVAPQR NRRRKVTELK  60
   61 CSEVRWFFQE PKGTLWNPFN GRDSIMLEIK YRKEKGIELD EAMQEIYDES LTHYKMEMKD 120
  121 EPEIENGNIG MEQEKPMVVV MNGQYKVNKD NSKIDPIYWK DDSKEIRRGS WFSPDYQPLE 180
  181 MPLSDQIEKN HLQCFRNQMI PEGTTVFSKS ETSNKPVLAE LHVDGYDIRW SSVIDISLHQ 240
  241 KGNAILRYLW AKSTPLRRGY EKEADWNDAA AEISHLILVV HGIGQKGYEN LIAQNANQVR 300
  301 DGVVSAMEKV YPEEKSRPMF LPVEWRSALK LDNGLTDNIT IPKMSSMRAS LNSTAMDVMY 360
  361 YQSPLFRTEI VRGVVSQLNR TYKLFKANNP QFNGHVSVFG HSLGSVICYD VLTQYSPLML 420
  421 FDKYVTKSID EYLKRDDTNA SEEARKALEA MKLAREQLRD NLEGGIHKLL VTKEEQLEFK 480
  481 VKYLFAVGSP LGVFLTMRGG ESTDLLSKAT NVERVFNIFH PYDPVAYRLE PFFAPEYRHI 540
  541 RPIKLFSNTD LRARASYENL PLDVYKHYLK KLKNLNKAKK NKDDKTADAR SGGDDENEDE 600
  601 DECDSDEDAR SGCSSPRSMT PPPFETAAAN AAAAAKETKA VKKGWFSFGT SSNPKKTQST 660
  661 ASLGSVNATS TENIEFAKEA AEELPLAEKI LGSGVRVPHR IDFQLQPALT EKSYWSVLKS 720
  721 HFAYWTNADL ALFLANVLYC KPLKPEEAKP TWA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run knl-1 No Comments Cheeseman, I.M., et al. (2004)
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] MSA 3.084976 View MSA. No confident structure predictions are available.
    2 View Details [264..753] FFAS03 0.982 Lipase L1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.768312194494454 bayes_pls_golite062009
  • hydrolase activity
    		•  0.305773042344667 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle