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Protein Overview: pqe-1

General Information:
Name(s) found: pqe-1 / CE30675 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00004095 locus:pqe-1 Putative RNA exonuclease pqe-1 status:Confirmed UniProt:Q10124 protein_id:CCD71615.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: exonuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTYYQSAPV LVHAHAYQPP LSPPQSPPHG YLPFYTSNPM MCSTSPLYFS PQMVQPLPPQ  60
   61 QHYHMYPSTS AGPGMYYTDF NPHYVQIQIS QSVSHDKILA GGPKDNCTVA RGRKTHVDHR 120
  121 QLSIEKLHPL LLQFKLTTSE LETNAYPMRR DGSTKAVSIA DTVYTQNKKM FLDDYDMSRN 180
  181 CSRCNKEFKL SPNGTMIRST GICRYHNRGV AINGKRDTFR KRYSCCNEEF NVALGCKFSD 240
  241 VHVTDQLFKK ELSTFVSTPV PVPNDQRSTR VYALDCEMVY TIAGPALARL TMVDMQRNRV 300
  301 LDVFVKPPTD VLDPNTEFSG LTMEQINSAP DTLKTCHQKL FKYVNADTIL IGHSLESDLK 360
  361 AMRVVHKNVI DTAILFRSTR DTKVALKVLS AKLLHKNIQG DNEDAIGHDS MEDALTCVDL 420
  421 IFYGLRNPES IAIREANTNC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..121] MSA 8.116994 View MSA. No confident structure predictions are available.
    2 View Details [122..266] FFAS03 1.05 Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa
    3 View Details [267..440] PSI-BLAST 36.30103 No description for 2guiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • binding
    		•  0.304205134456748 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle