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Protein Overview: pqe-1

General Information:
Name(s) found: pqe-1 / CE30672 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00004095 locus:pqe-1 Putative RNA exonuclease pqe-1 status:Confirmed UniProt:Q10124 protein_id:CCD71612.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 670 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: exonuclease activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNGGYGSGN SFNLQNYAPI DPMTGIPGFG PSQNAQQQQQ QASAPGTSSG GPSQAVSGAS  60
   61 SGASMKTEPV ARQVSTAQMK RDLEQAAVYV PTPIPKKDAK SSENRAKEKQ KPMNKRPTSS 120
  121 ASVDSNDDGV HIPAKRMAHA SSVPGPSRSK PPMIGAVKNR PNHTEMLDKR NKESEEKRRK 180
  181 DRDELERLRN KKHTTEEEKI KMARLQNALK VVGKAAGLKA TVKKELTGSP AKKQKPAPAV 240
  241 PKILDFSVGR TFTAIRQTAI KLVFDTFLER DSPNAAREAQ EFELSIAKQY TDGQKYRINI 300
  301 GHKVAALRKE NTSGILEVNK NAVSHDKILA GGPKDNCTVA RGRKTHVDHR QLSIEKLHPL 360
  361 LLQFKLTTSE LETNAYPMRR DGSTKAVSIA DTVYTQNKKM FLDDYDMSRN CSRCNKEFKL 420
  421 SPNGTMIRST GICRYHNRGV AINGKRDTFR KRYSCCNEEF NVALGCKFSD VHVTDQLFKK 480
  481 ELSTFVSTPV PVPNDQRSTR VYALDCEMVY TIAGPALARL TMVDMQRNRV LDVFVKPPTD 540
  541 VLDPNTEFSG LTMEQINSAP DTLKTCHQKL FKYVNADTIL IGHSLESDLK AMRVVHKNVI 600
  601 DTAILFRSTR DTKVALKVLS AKLLHKNIQG DNEDAIGHDS MEDALTCVDL IFYGLRNPES 660
  661 IAIREANTNC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..269] MSA 3.248996 View MSA. No confident structure predictions are available.
    2 View Details [270..340] deduced N/A No confident structure predictions are available.
    3 View Details [341..560] PSI-BLAST 5.09691 No description for 1zbuA was found.
    4 View Details [561..670] PSI-BLAST 43.0 human ISG20


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle