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Protein Overview: cdf-1

General Information:
Name(s) found: cdf-1 / CE29581 [WormBase]
Description(s) found:
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  • WBGene00000393 locus:cdf-1 Cation diffusion facilitator family protein 1 status:Partially_confirmed UniProt:Q95QW4 protein_id:CCD64571.1 [WormBase]
  • gi|75019666|sp|Q95QW4.1|CDF1_CAEEL RecName: Full=Cation diffusion facilitator family protein 1 [NCBI NR]
  • gi|17550440|ref|NP_509096.1| Cation Diffusion Facilitator family member (cdf-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|16041621|gb|AAL13323.1|U23529_8 Cation diffusion facilitator family protein 1, isoform b [Caenorhabditis elegans] [NCBI NR]
  • Cation diffusion facilitator family protein 1 OS=Caenorhabditis elegans GN=cdf-1 PE=1 SV=1 [Swiss-Prot]
  • [wormpep79.fasta]
  • CE29581 WBGene00000393 locus:cdf-1 status:Partially_confirmed TR:Q95QW4 protein_id:AAL13323.1 [wormpep150.fasta]
  • 29581 WBGene00000393 locus:cdf-1 status:Partially_confirmed TR:Q95QW4 protein_id:AAL13323.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • cation Diffusion Facilitator family member (cdf-1) [Caenorhabditis elegans]gi|16041621|gb|AAL13323.1| Cation diffusion facilitator family protein 1, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:cdf-1 status:Partially_confirmed TR:Q95QW4 protein_id:AAL13323.1 [wormpep115.fasta.reversed]
  • CE29581 locus:cdf-1 status:Partially_confirmed [wormpep80.hongbin]
  • CE29581 WBGene00000393 locus:cdf-1 status:Partially_confirmed UniProt:Q95QW4 protein_id:AAL13323.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29581 WBGene00000393 locus:cdf-1 status:Partially_confirmed UniProt:Q95QW4 protein_id:AAL13323.1| [wormORF-contam.fasta]
  • Cation diffusion facilitator family protein 1, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Cation Diffusion Facilitator family member (cdf-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29581 WBGene00000393 locus:cdf-1 status:Partially_confirmed SW:Q95QW4 protein_id:AAL13323.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29581 WBGene00000393 locus:cdf-1 status:Partially_confirmed UniProt:Q95QW4 protein_id:CCD64571.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE29581 WBGene00000393 locus:cdf-1 status:Partially_confirmed UniProt:Q95QW4 protein_id:CCD64571.1 Cation diffusion facilitator family protein 1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 561 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    plasma membrane [IDALink to PubMed article]
    Biological Process: positive regulation of vulval development [IMPLink to PubMed article]
    cation transport [IEALink to PubMed article]
    zinc ion transport [ISSLink to PubMed article]
    positive regulation of Ras protein signal transduction [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: zinc ion transmembrane transporter activity [ISSLink to PubMed article]
    cation transmembrane transporter activity [IEALink to PubMed article]
    binding [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTMEDRSV KADKADRDDN NTTSTELLGK MRQTKVISTN QNNNHLIDRM VSIYEMEMIK  60
   61 SQSTETISDV SDVLEFTVID NCSHGTHTLE HDLRLKGEPI GKSESVKGVS RSLIIQIGMT 120
  121 VIFCALEFIT GVVCSSIAML ADSYHMAADV MALIVAFTCI KIATRPSTRL GYGWVRAETL 180
  181 GGFFNGIFMC TVCVLVFQEA VGRIINVHMI THPLQVLVIG FIGLLINLFG MFNLSGHGHS 240
  241 HGGGSHGHSH GGSHGHSHNN KKTKKNDGHG HSHANGHGHS HDGKSDCNGE EEPDHTRLNG 300
  301 KFRSASAMAN SDANVRLLDN DDNSNDIIER RLSGVNSQNT IIATVDRQMT PYGTHMASEV 360
  361 LNVSSNNLDK SAQKTEQKKD KNVNIHGVWL HLLSDAFGSV IVMISAGFVY FLPTWKIAAY 420
  421 LDPILSISLA SIMGFTAVVL VKTSGEKLLK QTPEGLDLEK VKKDLCSIVG VSKVEKLSVW 480
  481 TLCGQRIIAA AHVNICHPAV FPEAAYKIKN YFHDLGVHST TIEPTFEDTC MQSMRIMVKK 540
  541 VVDGKSIEEP VSVSTENEIT E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..95] deduced N/A No confident structure predictions are available.
    2 View Details [96..269] FFAS03 5.61 No description for 2qfiA was found.
    3 View Details [270..561] PSI-BLAST 42.69897 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • protein binding
    		•  0.750157541821141 bayes_pls_golite062009
  • binding
    		•  0.573250496054441 bayes_pls_golite062009
    3
    Term Confidence Notes
  • protein binding
    		•  0.743159456460354 bayes_pls_golite062009
  • binding
    		•  0.562757473446686 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle