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Protein Overview: CE29546

General Information:
Name(s) found: CE29546 [WormBase]
Description(s) found:
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  • WBGene00015147 status:Confirmed UniProt:H2KY76 protein_id:CCD61522.1 [WormBase]
  • gi|17551828|ref|NP_498227.1| hypothetical protein B0336.7 [Caenorhabditis elegans] [NCBI NR]
  • gi|15963724|gb|AAK18855.2| Hypothetical protein B0336.7a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep79.fasta]
  • CE29546 WBGene00015147 status:Confirmed TR:Q10930 protein_id:AAK18855.2 [wormpep150.fasta]
  • 29546 WBGene00015147 status:Confirmed TR:Q10930 protein_id:AAK18855.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative prenylated protein, with a coiled coil domain (58.9 kD) (3G784) [Caenorhabditis elegans]gi|15963724|gb|AAK18855.2| Hypothetical protein B0336.7a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Confirmed TR:Q10930 protein_id:AAK18855.2 [wormpep115.fasta.reversed]
  • CE29546 status:Confirmed TR:Q10930 protein_id:AAK18855.2 [wormpep80.hongbin]
  • CE29546 WBGene00015147 status:Confirmed UniProt:Q10930_CAEEL protein_id:AAK18855.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29546 WBGene00015147 status:Confirmed UniProt:Q10930_CAEEL protein_id:AAK18855.2| [wormORF-contam.fasta]
  • B0336.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein B0336.7a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29546 WBGene00015147 status:Confirmed UniProt:Q10930 protein_id:AAK18855.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29546 WBGene00015147 status:Confirmed UniProt:H2KY76 protein_id:CCD61522.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=B0336.7 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: hermaphrodite genitalia development [IMP]
    morphogenesis of an epithelium [IMP]
    nematode larval development [IMP]
    embryonic development ending in birth or egg hatching [IMP]
    determination of adult lifespan [IMP]
    body morphogenesis [IMP]
    reproduction [IMP]
    growth [IMP]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKIDHDED DRDSSEYEEM DDDGEEAEID MEQHEMIYEK DIEPVEQFQQ EYISDQEPTS  60
   61 SNHEEIPVSM KIDYEEVYPH NAVQVDNAHE MVEAEKVYYE NEMEDLVYHE IYRIEGNQKQ 120
  121 ENYKRIRNIV GSSASCLVCQ RSESEKIRLF KWPKSEELKE QWLHFFRLPA TVLQSATQEP 180
  181 YICCYHFSAD TFVMIDDRIF WKMTALPKYR QRRPGLAEPF PWEPAVKHKM EMMQSTDTTN 240
  241 NSSVVEYKIR YRMPFNKHKT RNVHQVAVMT PVAQPHLYYE FHFNRYGLNN TKFYACLSCR 300
  301 KAKTESGIRD VIRTIHLDGY KFLSNGDPFN GHHFACRPHN VYDYKSSWRP VPGQNGEANF 360
  361 LDEVVYVDEG GNSLEWHAVT RPGDNREVEA VHEKEDPPIM MYDGNFEDPI TEEVIETNYV 420
  421 LDEPPVLYSQ DPDRKPKPSK KSRIKCHLCL KTSFSSTQSL VDHLQKHILD EKECKRCQKR 480
  481 ISCDSRAICI RRGVCGSCFV V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] MSA 3.088995 View MSA. No confident structure predictions are available.
    2 View Details [133..221] Pfam 16.173925 No description for PF05485.3 was found. No confident structure predictions are available.
    3 View Details [222..353] deduced N/A No confident structure predictions are available.
    4 View Details [354..501] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle