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Protein Overview: CE29443

General Information:
Name(s) found: CE29443 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00019900 locus:vdac-1 Probable voltage-dependent anion-selective channel status:Confirmed UniProt:Q21752 protein_id:CCD71556.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 283 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial outer membrane [IEALink to PubMed article]
    Biological Process: anion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated anion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPTFADLG KSAKDLFNKG YNFGFLKIDS TTRAGDNKEV EFKSAASHNI GSGKLGGNLD  60
   61 VKYKIPQYGI TLTEKWNTEN QLGTVIEVNE QFGRGLKVTL DSLYAPHAGK RSGKVKLDWA 120
  121 LPTARVTADV GVTSAPVINA AGVFSRDGWL IGAAATFDSS SNKLAATSLA FGHSTPQYTL 180
  181 HSFVINSTDF GASLYHKVAS NVEVGTQLGW KVGGNGADYA LATKYAPSRD LTVRAKVNSS 240
  241 SQVAVAATHS LSPALKLTLS TQFNLAANDA HKFGLGLEFD PSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] Pfam 7.283997 No description for PF01459.13 was found. No confident structure predictions are available.
    2 View Details [160..283] FFAS03 0.951 No description for 2ervA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle