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Protein Overview: CE29368

General Information:
Name(s) found: CE29368 [WormBase]
Description(s) found:
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  • WBGene00021240 status:Predicted UniProt:Q95XA4 protein_id:CCD73419.1 [WormBase]
  • gi|17509777|ref|NP_490921.1| hypothetical protein Y20F4.5 [Caenorhabditis elegans] [NCBI NR]
  • gi|15487583|gb|AAL00865.1|AC093703_5 Hypothetical protein Y20F4.5 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE29368 WBGene00021240 status:Predicted TR:Q95XA4 protein_id:AAL00865.1 [wormpep150.fasta]
  • 29368 WBGene00021240 status:Predicted TR:Q95XA4 protein_id:AAL00865.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein family member, with a coiled coil-4 domain (1C618) [Caenorhabditis elegans]gi|15487583|gb|AAL00865.1| Hypothetical protein Y20F4.5 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q95XA4 protein_id:AAL00865.1 [wormpep115.fasta.reversed]
  • CE29368 status:Predicted TR:Q95XA4 protein_id:AAL00865.1 [wormpep80.hongbin]
  • CE29368 WBGene00021240 status:Predicted UniProt:Q95XA4_CAEEL protein_id:AAL00865.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE29368 WBGene00021240 status:Predicted UniProt:Q95XA4_CAEEL protein_id:AAL00865.1| [wormORF-contam.fasta]
  • Hypothetical protein Y20F4.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y20F4.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE29368 WBGene00021240 status:Predicted UniProt:Q95XA4 protein_id:AAL00865.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE29368 WBGene00021240 status:Predicted UniProt:Q95XA4 protein_id:CCD73419.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 725 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMP]
    meiotic chromosome segregation [IMP]
    meiosis [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPSNQSAW SSNLLNARKR RWKKDEEDEN SNTERNASLD LNLSNVELTE ALDRNGDAQI  60
   61 TPERRRVSPF VDFDDNLDVE SKRNIDLNLT ITPETDIPFD TQPSTSSIAE SSSSPPRTPH 120
  121 SFERSSSPLY SSSDSVGVFS NETPYVKGIR EDLSRERMRF LEVDSILDSI SEKYLQQNDS 180
  181 QSFQVQLTHW QTIIFQEKCR FSNNQLRRVK QNYKMFTDLE IMPTINLTMQ RKTRMSTIDN 240
  241 YKATTYISKG EKVTVVKIID VEKSVIPKLE RLSVSKQLRH DSYTDGKIVI GIGGDSGGGT 300
  301 TKLCLLIGNC DHANSPHRIV LLAVFDDSDS RELIMAYLSD LIVKINNFTS ITYMEDGRVV 360
  361 TRGVVQKVVG DFKFTCDLLS HKKQCATYFC PFCFETNPRG GLMQKLKDLN LQKIYFLKTM 420
  421 NSYKLNSKYG SFGVRCGSGP ILQNVKLEHY LPAMLHLIVG LFTKYIFEPI WMAVIQDANK 480
  481 KFEASPLKRK REMKAQFTAL KEEKVLLDET LDGLAGGYLK QFENDLEEVG ATRRAWFQMY 540
  541 TGNHTKLILS EKGVTAAFKN LKNHMTPMLL NVKNAMSRLS KIMSLSANRL LSDDDISELD 600
  601 ESMKEFVEFL QAAHPEESIT QKLHVLVAHV VEVAKTERNL GRLSEQGIES LHAVFNRLER 660
  661 RFHSVRNTGK RYLTPRLPNK PPSALPHTIL NLFAIKISGF PQYHKIRDFL WLVVKTLTSR 720
  721 YSVQI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] deduced N/A No confident structure predictions are available.
    2 View Details [177..414] deduced N/A No confident structure predictions are available.
    3 View Details [415..587] MSA 1.01498 View MSA. No confident structure predictions are available.
    4 View Details [588..725] MSA 2.013979 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle